Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
VGLL1Q99990 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VGLL1Q99990 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.1□□□□□ -1.75
VGLL1Q99990 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.1□□□□□ -1.75
VGLL1Q99990 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.1□□□□□ -1.75
VGLL1Q99990 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VGLL1Q99990 RNU6-252P-201ENST00000363232 107 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 RN7SKP292-201ENST00000365522 317 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC004386.1-201ENST00000393214 761 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 ANAPC10P1-201ENST00000395991 556 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
VGLL1Q99990 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC241520.1-201ENST00000422654 1099 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC092447.2-201ENST00000435487 669 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 ELOCP11-201ENST00000436690 332 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 ELOCP16-201ENST00000444494 332 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AL627224.1-201ENST00000448334 444 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 EXOSC3P1-201ENST00000448649 500 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AC090804.1-201ENST00000448870 490 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.1□□□□□ -1.75
VGLL1Q99990 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC093166.2-201ENST00000455969 1017 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.1□□□□□ -1.75
VGLL1Q99990 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AL049874.2-201ENST00000492636 288 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AC093890.1-201ENST00000502554 540 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AC021146.5-201ENST00000503544 545 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.1□□□□□ -1.75
VGLL1Q99990 PRELID3BP5-201ENST00000508612 460 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.1□□□□□ -1.75
VGLL1Q99990 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC060775.1-201ENST00000518241 520 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AC010376.1-201ENST00000522101 334 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.1□□□□□ -1.75
VGLL1Q99990 DUXAP5-201ENST00000529668 529 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 TOMM20P1-201ENST00000534518 427 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 OR11H3P-201ENST00000554547 982 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AC025918.2-201ENST00000558683 763 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
VGLL1Q99990 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC093424.1-201ENST00000604999 338 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.1□□□□□ -1.75
VGLL1Q99990 AC079395.3-201ENST00000615161 484 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.1□□□□□ -1.75
VGLL1Q99990 RN7SL544P-201ENST00000617232 284 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AC078880.5-201ENST00000617845 421 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 RN7SL763P-201ENST00000620922 284 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AC135068.5-201ENST00000624197 983 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 AC087565.3-203ENST00000641018 837 ntBASIC4.1□□□□□ -1.75
VGLL1Q99990 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.1□□□□□ -1.75
VGLL1Q99990 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
VGLL1Q99990 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VGLL1Q99990 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VGLL1Q99990 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
VGLL1Q99990 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
VGLL1Q99990 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
VGLL1Q99990 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
VGLL1Q99990 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VGLL1Q99990 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VGLL1Q99990 RNU6-1251P-201ENST00000364502 107 ntBASIC4.09□□□□□ -1.75
VGLL1Q99990 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.09□□□□□ -1.75
VGLL1Q99990 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VGLL1Q99990 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VGLL1Q99990 RNU6-298P-201ENST00000390888 96 ntBASIC4.09□□□□□ -1.75
VGLL1Q99990 RNU6-796P-201ENST00000391086 107 ntBASIC4.09□□□□□ -1.75
VGLL1Q99990 OR7E101P-201ENST00000400428 513 ntBASIC4.09□□□□□ -1.75
VGLL1Q99990 VN1R12P-201ENST00000403778 876 ntBASIC4.09□□□□□ -1.75
VGLL1Q99990 AC099535.1-201ENST00000408928 371 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms