Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC7Q96M83 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC7Q96M83 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC7Q96M83 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC7Q96M83 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CCDC7Q96M83 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC7Q96M83 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC7Q96M83 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC7Q96M83 U3.23-201ENST00000391132 200 ntBASIC6.74□□□□□ -1.33
CCDC7Q96M83 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC7Q96M83 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC7Q96M83 AC009963.2-201ENST00000453431 138 ntBASIC6.74□□□□□ -1.33
CCDC7Q96M83 STRADBP1-201ENST00000478954 1281 ntBASIC6.74□□□□□ -1.33
CCDC7Q96M83 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.74□□□□□ -1.33
CCDC7Q96M83 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC7Q96M83 HMGB3P16-201ENST00000508037 287 ntBASIC6.74□□□□□ -1.33
CCDC7Q96M83 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC7Q96M83 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC7Q96M83 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC7Q96M83 Y_RNA.719-201ENST00000517156 106 ntBASIC6.74□□□□□ -1.33
CCDC7Q96M83 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC7Q96M83 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC7Q96M83 RN7SL802P-201ENST00000577858 299 ntBASIC6.74□□□□□ -1.33
CCDC7Q96M83 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC7Q96M83 AC006453.5-201ENST00000636451 619 ntBASIC6.74□□□□□ -1.33
CCDC7Q96M83 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC7Q96M83 AL034370.1-201ENST00000397254 1590 ntBASIC6.74□□□□□ -1.33
CCDC7Q96M83 AC025574.1-201ENST00000554784 1653 ntBASIC6.74□□□□□ -1.33
CCDC7Q96M83 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC7Q96M83 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC7Q96M83 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC7Q96M83 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
CCDC7Q96M83 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
CCDC7Q96M83 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CCDC7Q96M83 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC7Q96M83 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC7Q96M83 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC7Q96M83 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC7Q96M83 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CCDC7Q96M83 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC7Q96M83 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC7Q96M83 AC069213.2-201ENST00000420238 366 ntBASIC6.73□□□□□ -1.33
CCDC7Q96M83 GLUD1P9-201ENST00000420997 1173 ntBASIC6.73□□□□□ -1.33
CCDC7Q96M83 RPL7P57-201ENST00000423238 740 ntBASIC6.73□□□□□ -1.33
CCDC7Q96M83 AC234781.3-201ENST00000452540 973 ntBASIC6.73□□□□□ -1.33
CCDC7Q96M83 AL356390.1-201ENST00000455684 397 ntBASIC6.73□□□□□ -1.33
CCDC7Q96M83 IGKV2D-10-201ENST00000520194 281 ntBASIC6.73□□□□□ -1.33
CCDC7Q96M83 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC7Q96M83 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC7Q96M83 AC016717.3-201ENST00000624730 554 ntBASIC6.73□□□□□ -1.33
CCDC7Q96M83 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC7Q96M83 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC7Q96M83 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC7Q96M83 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC7Q96M83 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
CCDC7Q96M83 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC7Q96M83 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC7Q96M83 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC7Q96M83 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC7Q96M83 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC7Q96M83 GVINP1-202ENST00000531871 7271 ntBASIC6.72□□□□□ -1.33
CCDC7Q96M83 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 RNA5SP191-201ENST00000362585 102 ntBASIC6.72□□□□□ -1.33
CCDC7Q96M83 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 P2RY10P2-201ENST00000416730 913 ntBASIC6.72□□□□□ -1.33
CCDC7Q96M83 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 AL161722.1-201ENST00000446972 1032 ntBASIC6.72□□□□□ -1.33
CCDC7Q96M83 AC010733.1-201ENST00000451515 401 ntBASIC6.72□□□□□ -1.33
CCDC7Q96M83 AURKAPS2-201ENST00000454983 333 ntBASIC6.72□□□□□ -1.33
CCDC7Q96M83 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC7Q96M83 AC020890.1-201ENST00000491837 504 ntBASIC6.72□□□□□ -1.33
CCDC7Q96M83 MORF4L2P1-201ENST00000503761 858 ntBASIC6.72□□□□□ -1.33
CCDC7Q96M83 IGBP1P5-201ENST00000507524 1000 ntBASIC6.72□□□□□ -1.33
CCDC7Q96M83 RNA5SP303-201ENST00000516192 130 ntBASIC6.72□□□□□ -1.33
CCDC7Q96M83 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC7Q96M83 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 AC023632.6-201ENST00000624338 2177 ntBASIC6.72□□□□□ -1.33
CCDC7Q96M83 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC7Q96M83 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC7Q96M83 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC7Q96M83 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC7Q96M83 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC7Q96M83 MAPK10-304ENST00000641341 3984 ntBASIC6.72□□□□□ -1.33
CCDC7Q96M83 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC7Q96M83 RPL32P3-201ENST00000359025 275 ntBASIC6.71□□□□□ -1.33
CCDC7Q96M83 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC7Q96M83 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
CCDC7Q96M83 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
CCDC7Q96M83 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC7Q96M83 LINC00993-201ENST00000420453 540 ntBASIC6.71□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms