Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.26□□□□□ -1.57
RTP4Q96DX8 AC034236.3-201ENST00000605999 461 ntBASIC5.26□□□□□ -1.57
RTP4Q96DX8 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.26□□□□□ -1.57
RTP4Q96DX8 AL138955.1-201ENST00000622881 1040 ntBASIC5.26□□□□□ -1.57
RTP4Q96DX8 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.26□□□□□ -1.57
RTP4Q96DX8 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.26□□□□□ -1.57
RTP4Q96DX8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTP4Q96DX8 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
RTP4Q96DX8 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RTP4Q96DX8 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTP4Q96DX8 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTP4Q96DX8 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RTP4Q96DX8 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RTP4Q96DX8 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RTP4Q96DX8 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 U8.4-201ENST00000363626 134 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 MIR122-201ENST00000385044 85 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 MTCO2P1-201ENST00000424648 477 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 AC108075.1-201ENST00000424692 529 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AC005033.1-201ENST00000428904 813 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 MTND2P2-201ENST00000434633 945 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AC012512.1-201ENST00000446594 718 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 OTX2P1-201ENST00000450956 354 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 RN7SL808P-201ENST00000496066 299 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 GTF2F2P1-201ENST00000511083 675 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 AC034244.2-201ENST00000514668 858 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 RPL23AP53-201ENST00000521854 457 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AC079148.1-201ENST00000565944 819 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AC006116.5-201ENST00000591936 559 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AC126915.2-201ENST00000610957 190 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 AL356752.1-201ENST00000615844 593 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AC138965.3-201ENST00000623875 498 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 TCP11X1-202ENST00000622971 1372 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AL121839.2-201ENST00000565058 6943 ntBASIC5.25□□□□□ -1.57
RTP4Q96DX8 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RTP4Q96DX8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RTP4Q96DX8 AC003985.2-201ENST00000562268 1669 ntBASIC5.24□□□□□ -1.57
RTP4Q96DX8 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTP4Q96DX8 DDX6P1-205ENST00000441966 1436 ntBASIC5.24□□□□□ -1.57
RTP4Q96DX8 MTCO1P4-201ENST00000520516 1409 ntBASIC5.24□□□□□ -1.57
RTP4Q96DX8 PANDAR-201ENST00000629595 1506 ntBASIC5.24□□□□□ -1.57
RTP4Q96DX8 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RTP4Q96DX8 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RTP4Q96DX8 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTP4Q96DX8 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RTP4Q96DX8 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RTP4Q96DX8 U3.2-201ENST00000362981 210 ntBASIC5.24□□□□□ -1.57
RTP4Q96DX8 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.24□□□□□ -1.57
RTP4Q96DX8 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RTP4Q96DX8 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.24□□□□□ -1.57
RTP4Q96DX8 SNORA2.3-201ENST00000383920 135 ntBASIC5.24□□□□□ -1.57
RTP4Q96DX8 AC013442.1-201ENST00000397347 228 ntBASIC5.24□□□□□ -1.57
RTP4Q96DX8 RN7SKP213-201ENST00000410746 298 ntBASIC5.24□□□□□ -1.57
RTP4Q96DX8 RPL12P43-201ENST00000420608 499 ntBASIC5.24□□□□□ -1.57
RTP4Q96DX8 RCC2P2-201ENST00000422174 918 ntBASIC5.24□□□□□ -1.57
RTP4Q96DX8 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.24□□□□□ -1.57
RTP4Q96DX8 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.24□□□□□ -1.57
RTP4Q96DX8 MRPL50P1-201ENST00000431951 384 ntBASIC5.24□□□□□ -1.57
RTP4Q96DX8 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.24□□□□□ -1.57
RTP4Q96DX8 CLIC4P1-201ENST00000453177 535 ntBASIC5.24□□□□□ -1.57
RTP4Q96DX8 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.24□□□□□ -1.57
RTP4Q96DX8 RPSAP50-201ENST00000481955 852 ntBASIC5.24□□□□□ -1.57
RTP4Q96DX8 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RTP4Q96DX8 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.24□□□□□ -1.57
RTP4Q96DX8 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.24□□□□□ -1.57
RTP4Q96DX8 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms