Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC108729.2-201ENST00000476543 840 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 RN7SL273P-201ENST00000481561 299 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC058823.1-201ENST00000485315 474 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 RN7SL346P-201ENST00000491561 294 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 RPL37P23-201ENST00000492641 294 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 RNA5SP473-201ENST00000516402 125 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC013701.1-201ENST00000522657 465 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 MIR6780B-201ENST00000610307 79 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 MIR7973-1-201ENST00000614683 76 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC020923.1-201ENST00000624021 917 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AC073593.1-201ENST00000624500 411 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 AL596275.2-207ENST00000641188 675 ntBASIC5.09□□□□□ -1.59
VPS33AQ96AX1 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS33AQ96AX1 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
VPS33AQ96AX1 AL731566.1-201ENST00000620490 1937 ntBASIC5.09□□□□□ -1.6
VPS33AQ96AX1 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.09□□□□□ -1.6
VPS33AQ96AX1 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VPS33AQ96AX1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AC106872.5-201ENST00000508856 1416 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 OR52B3P-201ENST00000314715 928 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 RNA5SP433-201ENST00000364491 114 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 RN7SKP28-201ENST00000364770 305 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 USP9YP19-201ENST00000412165 485 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AC010385.1-201ENST00000412374 256 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 RPS26P47-201ENST00000427219 348 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AC019185.1-201ENST00000442718 389 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 CBX1P5-201ENST00000475330 559 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 RPL7P41-201ENST00000485823 957 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 RN7SL170P-201ENST00000487098 295 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 RN7SL814P-201ENST00000487715 300 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 MTND3P24-201ENST00000506306 329 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 RNU6-347P-201ENST00000516658 105 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 RNA5SP271-201ENST00000516700 88 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 SNORA76.2-201ENST00000517095 137 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 IGBP1P1-201ENST00000554337 1009 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AP001033.2-201ENST00000609701 1003 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AC016957.2-201ENST00000616998 848 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AC139769.3-201ENST00000618383 175 ntBASIC5.08□□□□□ -1.6
VPS33AQ96AX1 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VPS33AQ96AX1 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 AL450326.2-201ENST00000421913 1962 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.07□□□□□ -1.6
VPS33AQ96AX1 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS33AQ96AX1 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms