Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNED1Q8TER0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNED1Q8TER0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNED1Q8TER0 SAMM50P1-201ENST00000455403 1399 ntBASIC5.87□□□□□ -1.47
SNED1Q8TER0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SNED1Q8TER0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNED1Q8TER0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNED1Q8TER0 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNED1Q8TER0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
SNED1Q8TER0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNED1Q8TER0 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SNED1Q8TER0 MIR659-201ENST00000384963 97 ntBASIC5.86□□□□□ -1.47
SNED1Q8TER0 OR52E3P-201ENST00000452083 936 ntBASIC5.86□□□□□ -1.47
SNED1Q8TER0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNED1Q8TER0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.86□□□□□ -1.47
SNED1Q8TER0 MTND4LP2-201ENST00000502312 285 ntBASIC5.86□□□□□ -1.47
SNED1Q8TER0 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.86□□□□□ -1.47
SNED1Q8TER0 AC133555.2-201ENST00000550213 292 ntBASIC5.86□□□□□ -1.47
SNED1Q8TER0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SNED1Q8TER0 MIR3939-201ENST00000582614 106 ntBASIC5.86□□□□□ -1.47
SNED1Q8TER0 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNED1Q8TER0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SNED1Q8TER0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNED1Q8TER0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNED1Q8TER0 TLK1P1-201ENST00000456760 2440 ntBASIC5.86□□□□□ -1.47
SNED1Q8TER0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNED1Q8TER0 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.86□□□□□ -1.47
SNED1Q8TER0 AC097063.1-201ENST00000426714 1797 ntBASIC5.85□□□□□ -1.47
SNED1Q8TER0 OR4G1P-202ENST00000641173 1788 ntBASIC5.85□□□□□ -1.47
SNED1Q8TER0 AC108751.5-201ENST00000492880 1336 ntBASIC5.85□□□□□ -1.47
SNED1Q8TER0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNED1Q8TER0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNED1Q8TER0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.85□□□□□ -1.47
SNED1Q8TER0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNED1Q8TER0 AC007618.1-201ENST00000366455 732 ntBASIC5.85□□□□□ -1.47
SNED1Q8TER0 MIR134-201ENST00000385258 73 ntBASIC5.85□□□□□ -1.47
SNED1Q8TER0 OR6C69P-201ENST00000394268 893 ntBASIC5.85□□□□□ -1.47
SNED1Q8TER0 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.85□□□□□ -1.47
SNED1Q8TER0 AC140479.3-201ENST00000418944 1126 ntBASIC5.85□□□□□ -1.47
SNED1Q8TER0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.85□□□□□ -1.47
SNED1Q8TER0 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.85□□□□□ -1.47
SNED1Q8TER0 MTND2P28-201ENST00000457540 1044 ntBASIC5.85□□□□□ -1.47
SNED1Q8TER0 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SNED1Q8TER0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.85□□□□□ -1.47
SNED1Q8TER0 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.85□□□□□ -1.47
SNED1Q8TER0 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
SNED1Q8TER0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SNED1Q8TER0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SNED1Q8TER0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.85□□□□□ -1.47
SNED1Q8TER0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
SNED1Q8TER0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNED1Q8TER0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNED1Q8TER0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNED1Q8TER0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNED1Q8TER0 AC100871.1-201ENST00000507871 1456 ntBASIC5.85□□□□□ -1.47
SNED1Q8TER0 SAMMSON-210ENST00000641260 1308 ntBASIC5.85□□□□□ -1.47
SNED1Q8TER0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNED1Q8TER0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNED1Q8TER0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNED1Q8TER0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNED1Q8TER0 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNED1Q8TER0 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SNED1Q8TER0 RPL23AP59-201ENST00000399415 461 ntBASIC5.84□□□□□ -1.47
SNED1Q8TER0 RN7SKP263-201ENST00000411194 309 ntBASIC5.84□□□□□ -1.47
SNED1Q8TER0 AC079168.2-201ENST00000453977 416 ntBASIC5.84□□□□□ -1.47
SNED1Q8TER0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.84□□□□□ -1.47
SNED1Q8TER0 AC073358.1-201ENST00000505671 684 ntBASIC5.84□□□□□ -1.47
SNED1Q8TER0 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.84□□□□□ -1.47
SNED1Q8TER0 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNED1Q8TER0 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNED1Q8TER0 AC100784.1-201ENST00000522790 310 ntBASIC5.84□□□□□ -1.47
SNED1Q8TER0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.84□□□□□ -1.47
SNED1Q8TER0 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.84□□□□□ -1.47
SNED1Q8TER0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNED1Q8TER0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.84□□□□□ -1.47
SNED1Q8TER0 AP001029.2-203ENST00000589795 4910 ntBASIC5.84□□□□□ -1.47
SNED1Q8TER0 AC004817.4-201ENST00000602396 3625 ntBASIC5.84□□□□□ -1.47
SNED1Q8TER0 ZFRP1-201ENST00000457579 2970 ntBASIC5.84□□□□□ -1.47
SNED1Q8TER0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.84□□□□□ -1.47
SNED1Q8TER0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNED1Q8TER0 AC093671.1-201ENST00000624981 2929 ntBASIC5.84□□□□□ -1.47
SNED1Q8TER0 AC140134.1-201ENST00000511830 3544 ntBASIC5.84□□□□□ -1.47
SNED1Q8TER0 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
SNED1Q8TER0 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SNED1Q8TER0 SALL4P2-201ENST00000423288 2910 ntBASIC5.83□□□□□ -1.48
SNED1Q8TER0 AC002525.1-201ENST00000624392 1622 ntBASIC5.83□□□□□ -1.48
SNED1Q8TER0 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNED1Q8TER0 RPS20P25-201ENST00000412447 352 ntBASIC5.83□□□□□ -1.48
SNED1Q8TER0 AL354766.1-201ENST00000423396 542 ntBASIC5.83□□□□□ -1.48
SNED1Q8TER0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNED1Q8TER0 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 AC093840.1-201ENST00000511599 336 ntBASIC5.83□□□□□ -1.48
SNED1Q8TER0 RNU1-6P-201ENST00000516290 144 ntBASIC5.83□□□□□ -1.48
SNED1Q8TER0 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.83□□□□□ -1.48
SNED1Q8TER0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms