Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 Y_RNA.719-201ENST00000517156 106 ntBASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 AC005868.1-201ENST00000536421 331 ntBASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 MEMO1P5-201ENST00000604810 406 ntBASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 AL355480.1-201ENST00000629041 99 ntBASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 RARSP1-201ENST00000542842 1418 ntBASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC65Q8IXS2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AC025574.1-201ENST00000554784 1653 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 RNA5SP305-201ENST00000362665 119 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 RN7SKP224-201ENST00000364140 325 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 SNORA68.2-201ENST00000391263 128 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AL050305.1-201ENST00000399993 1230 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AP002530.1-201ENST00000405705 684 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 MIR1178-201ENST00000408396 91 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 RN7SKP213-201ENST00000410746 298 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 RPSAP50-201ENST00000481955 852 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 NIP7P2-201ENST00000485801 544 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AC027308.1-201ENST00000517993 110 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AP000894.4-201ENST00000610185 483 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AL356752.1-201ENST00000615844 593 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AC015914.2-201ENST00000618167 288 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AC243960.7-201ENST00000623532 707 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AP002799.1-201ENST00000623552 423 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 AL353662.3-201ENST00000625131 237 ntBASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC65Q8IXS2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC65Q8IXS2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
CCDC65Q8IXS2 AC104118.1-201ENST00000607625 1589 ntBASIC5.46□□□□□ -1.53
CCDC65Q8IXS2 CASC19-281ENST00000642118 1554 ntBASIC5.46□□□□□ -1.53
CCDC65Q8IXS2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 RNA5SP507-201ENST00000363603 121 ntBASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 RNU4-4P-201ENST00000364588 130 ntBASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 MYO5BP2-201ENST00000449815 1277 ntBASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 AC090142.2-201ENST00000483263 416 ntBASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 AC004815.1-201ENST00000484185 331 ntBASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 AC140172.1-201ENST00000502928 141 ntBASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 AC147055.3-201ENST00000510547 851 ntBASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 RNA5SP249-201ENST00000516127 99 ntBASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 SCARNA21.2-201ENST00000516600 166 ntBASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 AC026688.1-201ENST00000520639 1168 ntBASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CCDC65Q8IXS2 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 LINC01355-201ENST00000566551 5444 ntBASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC65Q8IXS2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms