Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 WBP1LP3-201ENST00000523033 208 ntBASIC4.85□□□□□ -1.63
C11orf88Q6PI97 AP000648.1-201ENST00000529682 397 ntBASIC4.85□□□□□ -1.63
C11orf88Q6PI97 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 AL031601.1-201ENST00000605702 394 ntBASIC4.85□□□□□ -1.63
C11orf88Q6PI97 AC123768.4-201ENST00000616244 701 ntBASIC4.85□□□□□ -1.63
C11orf88Q6PI97 AC022919.1-201ENST00000624979 626 ntBASIC4.85□□□□□ -1.63
C11orf88Q6PI97 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.85□□□□□ -1.63
C11orf88Q6PI97 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 GNL2P1-201ENST00000451274 2190 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC083843.3-201ENST00000623679 2186 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 USP9YP4-201ENST00000424401 1745 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC008627.1-201ENST00000517511 1704 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 RN7SKP78-201ENST00000364711 318 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 RNU6-98P-201ENST00000384173 107 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC019205.1-201ENST00000421830 730 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 IPPKP1-201ENST00000422501 768 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC023141.8-201ENST00000442554 208 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 PPIAP20-201ENST00000449839 135 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AL162388.1-201ENST00000450912 352 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 SETP20-201ENST00000457046 852 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC007998.1-201ENST00000474156 672 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 ATP5LP5-201ENST00000483050 299 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 PPIAP19-201ENST00000486414 492 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC069304.1-201ENST00000491593 704 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AL158068.1-201ENST00000506116 616 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC113430.1-201ENST00000506872 718 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC105384.2-201ENST00000508433 640 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 RN7SKP238-201ENST00000516483 249 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 OR8A2P-201ENST00000528631 952 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC084757.1-201ENST00000559987 490 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC106785.3-201ENST00000564064 847 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 MTND4LP24-201ENST00000572277 291 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC127024.5-201ENST00000580085 462 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AL139099.4-201ENST00000614802 114 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 LINC00901.1-201ENST00000617252 152 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC127024.6-201ENST00000621598 424 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 LINC01109-201ENST00000603837 3081 ntBASIC4.84□□□□□ -1.63
C11orf88Q6PI97 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.84□□□□□ -1.63
C11orf88Q6PI97 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
C11orf88Q6PI97 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
C11orf88Q6PI97 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.84□□□□□ -1.64
C11orf88Q6PI97 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
C11orf88Q6PI97 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
C11orf88Q6PI97 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.64
C11orf88Q6PI97 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms