Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC015871.4-201ENST00000624650 2260 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 AL353898.3-201ENST00000624679 1755 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 RNU6-1066P-201ENST00000363573 105 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 RNU6-704P-201ENST00000364162 103 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 RNA5SP23-201ENST00000391006 105 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 RNU2-23P-201ENST00000410545 195 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 RN7SKP236-201ENST00000410635 284 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 AL158073.1-201ENST00000426848 1104 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 RPS15AP10-201ENST00000432472 382 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 AC099344.1-201ENST00000433548 492 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 RPL21P2-201ENST00000440049 481 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 AC092601.1-201ENST00000444526 383 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 MTCO1P27-201ENST00000448269 226 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 RN7SL55P-201ENST00000464534 297 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 RN7SL145P-201ENST00000469955 296 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 AC058823.1-201ENST00000485315 474 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 CEACAMP10-202ENST00000495431 496 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 IGHVIII-76-1-201ENST00000523776 286 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 AL162632.2-201ENST00000553933 399 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 TRAV15-201ENST00000556680 249 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 HMGB3P26-201ENST00000560051 582 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 AC008385.1-201ENST00000604421 355 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 BX005040.2-201ENST00000620504 370 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 MPP6-209ENST00000625307 126 ntTSL 5 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 EEF1A1P26-201ENST00000458319 1363 ntBASIC8.21□□□□□ -1.1
VARS2Q5ST30 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC8.21□□□□□ -1.1
VARS2Q5ST30 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARS2Q5ST30 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARS2Q5ST30 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC8.2□□□□□ -1.1
VARS2Q5ST30 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VARS2Q5ST30 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
VARS2Q5ST30 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VARS2Q5ST30 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARS2Q5ST30 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.2□□□□□ -1.1
VARS2Q5ST30 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.2□□□□□ -1.1
VARS2Q5ST30 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARS2Q5ST30 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARS2Q5ST30 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARS2Q5ST30 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC8.2□□□□□ -1.1
VARS2Q5ST30 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARS2Q5ST30 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC8.2□□□□□ -1.1
VARS2Q5ST30 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VARS2Q5ST30 AC095038.1-201ENST00000429248 1591 ntBASIC8.2□□□□□ -1.1
VARS2Q5ST30 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.2□□□□□ -1.1
VARS2Q5ST30 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARS2Q5ST30 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARS2Q5ST30 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
VARS2Q5ST30 MIR613-201ENST00000385248 95 ntBASIC8.2□□□□□ -1.1
VARS2Q5ST30 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
VARS2Q5ST30 RNU2-51P-201ENST00000410708 197 ntBASIC8.2□□□□□ -1.1
VARS2Q5ST30 AL603650.1-201ENST00000412680 240 ntBASIC8.2□□□□□ -1.1
VARS2Q5ST30 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC8.2□□□□□ -1.1
VARS2Q5ST30 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.2□□□□□ -1.1
VARS2Q5ST30 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC8.2□□□□□ -1.1
VARS2Q5ST30 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC8.2□□□□□ -1.1
VARS2Q5ST30 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC8.2□□□□□ -1.1
VARS2Q5ST30 MEMO1P3-201ENST00000459811 302 ntBASIC8.2□□□□□ -1.1
VARS2Q5ST30 UBFD1P1-201ENST00000473259 814 ntBASIC8.2□□□□□ -1.1
VARS2Q5ST30 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
VARS2Q5ST30 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms