Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC090220.1-201ENST00000593078 1699 ntBASIC5.87□□□□□ -1.47
RFX7Q2KHR2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFX7Q2KHR2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFX7Q2KHR2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RFX7Q2KHR2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFX7Q2KHR2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.86□□□□□ -1.47
RFX7Q2KHR2 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFX7Q2KHR2 SNORA11-201ENST00000408789 128 ntBASIC5.86□□□□□ -1.47
RFX7Q2KHR2 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.86□□□□□ -1.47
RFX7Q2KHR2 AC005154.2-201ENST00000438110 379 ntBASIC5.86□□□□□ -1.47
RFX7Q2KHR2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.86□□□□□ -1.47
RFX7Q2KHR2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
RFX7Q2KHR2 RNU6-709P-201ENST00000517257 104 ntBASIC5.86□□□□□ -1.47
RFX7Q2KHR2 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RFX7Q2KHR2 SNORA74C-1-201ENST00000580726 201 ntBASIC5.86□□□□□ -1.47
RFX7Q2KHR2 MIR4433B-201ENST00000581329 102 ntBASIC5.86□□□□□ -1.47
RFX7Q2KHR2 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RFX7Q2KHR2 AC010435.1-201ENST00000623353 1177 ntBASIC5.86□□□□□ -1.47
RFX7Q2KHR2 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFX7Q2KHR2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.86□□□□□ -1.47
RFX7Q2KHR2 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFX7Q2KHR2 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 AC022893.2-201ENST00000564832 3296 ntBASIC5.85□□□□□ -1.47
RFX7Q2KHR2 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 PEX12P1-201ENST00000400284 1048 ntBASIC5.85□□□□□ -1.47
RFX7Q2KHR2 CTSL3P-202ENST00000412179 788 ntBASIC5.85□□□□□ -1.47
RFX7Q2KHR2 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 AC069213.2-201ENST00000420238 366 ntBASIC5.85□□□□□ -1.47
RFX7Q2KHR2 OR2B7P-201ENST00000429302 934 ntBASIC5.85□□□□□ -1.47
RFX7Q2KHR2 AC091390.1-201ENST00000433904 331 ntBASIC5.85□□□□□ -1.47
RFX7Q2KHR2 CYCSP42-201ENST00000450823 238 ntBASIC5.85□□□□□ -1.47
RFX7Q2KHR2 RPL12P20-201ENST00000475538 479 ntBASIC5.85□□□□□ -1.47
RFX7Q2KHR2 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 RAB9BP1-201ENST00000519581 626 ntBASIC5.85□□□□□ -1.47
RFX7Q2KHR2 SOX5P1-201ENST00000524155 1127 ntBASIC5.85□□□□□ -1.47
RFX7Q2KHR2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 AL442128.2-201ENST00000620246 1824 ntBASIC5.85□□□□□ -1.47
RFX7Q2KHR2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 SCARNA15-201ENST00000607520 4325 ntBASIC5.85□□□□□ -1.47
RFX7Q2KHR2 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFX7Q2KHR2 AC125257.1-201ENST00000560400 2930 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 DDX18P5-201ENST00000534547 1306 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 AL022393.1-201ENST00000625142 1677 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 ARL4AP5-201ENST00000404372 599 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 AP000580.1-201ENST00000404439 358 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 OR51B3P-201ENST00000412287 913 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 DPPA2P2-201ENST00000418220 897 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 RGS17P1-201ENST00000423358 553 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 NRBF2P3-201ENST00000432731 865 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 NDUFA12P1-201ENST00000455914 406 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 USP9YP2-201ENST00000504503 1000 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 HMGB3P16-201ENST00000508037 287 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 USP9YP1-201ENST00000513521 1002 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 AL110118.1-201ENST00000553543 400 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 AC009852.2-201ENST00000567898 485 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 AC012414.7-202ENST00000622705 1090 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 AP005435.3-201ENST00000531260 3198 ntBASIC5.84□□□□□ -1.47
RFX7Q2KHR2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFX7Q2KHR2 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.84□□□□□ -1.48
RFX7Q2KHR2 AL121950.1-201ENST00000624993 2077 ntBASIC5.83□□□□□ -1.48
RFX7Q2KHR2 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 GLULP6-201ENST00000399502 913 ntBASIC5.83□□□□□ -1.48
RFX7Q2KHR2 RPS16P5-201ENST00000406501 404 ntBASIC5.83□□□□□ -1.48
RFX7Q2KHR2 EIF4HP2-201ENST00000424380 563 ntBASIC5.83□□□□□ -1.48
RFX7Q2KHR2 OR1H1P-201ENST00000448731 937 ntBASIC5.83□□□□□ -1.48
RFX7Q2KHR2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.83□□□□□ -1.48
RFX7Q2KHR2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms