Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UBE3AQ05086 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBE3AQ05086 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
UBE3AQ05086 RNU2-17P-201ENST00000410290 190 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 RNU4-74P-201ENST00000411280 161 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 FAR2P2-201ENST00000413041 594 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 AL807761.1-201ENST00000417622 171 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 FAR2P4-202ENST00000425399 584 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 AC104837.2-201ENST00000427236 424 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 AC022022.1-201ENST00000430304 178 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 RPL31P44-201ENST00000447680 377 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.72□□□□□ -1.49
UBE3AQ05086 RPS3AP53-201ENST00000454716 778 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 SEPT7P3-201ENST00000455017 621 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.72□□□□□ -1.49
UBE3AQ05086 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.72□□□□□ -1.49
UBE3AQ05086 AC108751.3-201ENST00000461814 1020 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 AC092324.1-201ENST00000468671 324 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBE3AQ05086 PDCL3P4-201ENST00000489621 720 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.72□□□□□ -1.49
UBE3AQ05086 GTF2F2P1-201ENST00000511083 675 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.72□□□□□ -1.49
UBE3AQ05086 OR5AM1P-201ENST00000532136 1032 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UBE3AQ05086 AP001267.4-201ENST00000602598 545 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 AC005034.4-201ENST00000603612 899 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 AC079880.2-201ENST00000603790 1213 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.72□□□□□ -1.49
UBE3AQ05086 AC110792.4-201ENST00000609843 298 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 AC091905.4-201ENST00000623432 202 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.72□□□□□ -1.49
UBE3AQ05086 AC119674.1-212ENST00000641155 993 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
UBE3AQ05086 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
UBE3AQ05086 AP000473.2-201ENST00000602659 1537 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 AL158152.1-201ENST00000602652 1435 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UBE3AQ05086 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBE3AQ05086 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBE3AQ05086 AC068870.3-201ENST00000625077 2536 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBE3AQ05086 BCORP1-203ENST00000513194 5093 ntBASIC5.72□□□□□ -1.49
UBE3AQ05086 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBE3AQ05086 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
UBE3AQ05086 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
UBE3AQ05086 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBE3AQ05086 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
UBE3AQ05086 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
UBE3AQ05086 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
UBE3AQ05086 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.71□□□□□ -1.49
UBE3AQ05086 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
UBE3AQ05086 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.71□□□□□ -1.49
UBE3AQ05086 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
UBE3AQ05086 MIR16-2-201ENST00000362117 81 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 RN7SKP104-201ENST00000362605 328 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 RNA5SP326-201ENST00000363209 110 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 GCNT6-201ENST00000379591 934 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 SNORA51.8-201ENST00000384234 132 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 OR4K12P-201ENST00000406538 961 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.71□□□□□ -1.5
UBE3AQ05086 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.71□□□□□ -1.5
UBE3AQ05086 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
UBE3AQ05086 MTCO2P1-201ENST00000424648 477 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 USP9YP9-201ENST00000429406 715 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 AL512661.1-201ENST00000434586 1253 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.71□□□□□ -1.5
UBE3AQ05086 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.71□□□□□ -1.5
UBE3AQ05086 CEACAMP9-201ENST00000442990 513 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.71□□□□□ -1.5
UBE3AQ05086 GYG1P1-201ENST00000460864 698 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 AC097484.1-201ENST00000471148 389 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.71□□□□□ -1.5
UBE3AQ05086 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.71□□□□□ -1.5
UBE3AQ05086 AC109464.1-201ENST00000511091 819 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.71□□□□□ -1.5
UBE3AQ05086 SNORA70.11-201ENST00000515987 138 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 SNORA70.13-201ENST00000516116 138 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 RN7SKP141-201ENST00000516167 338 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 RNU6-334P-201ENST00000517072 102 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 RNA5SP373-201ENST00000517271 95 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.71□□□□□ -1.5
UBE3AQ05086 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.71□□□□□ -1.5
UBE3AQ05086 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.71□□□□□ -1.5
UBE3AQ05086 AP004607.2-201ENST00000533949 322 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.71□□□□□ -1.5
UBE3AQ05086 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.71□□□□□ -1.5
UBE3AQ05086 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.71□□□□□ -1.5
UBE3AQ05086 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.71□□□□□ -1.5
UBE3AQ05086 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.71□□□□□ -1.5
UBE3AQ05086 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.71□□□□□ -1.5
UBE3AQ05086 AC011487.3-201ENST00000593607 453 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.71□□□□□ -1.5
UBE3AQ05086 MIR8084-201ENST00000614105 89 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 AC145207.9-201ENST00000623802 325 ntBASIC5.71□□□□□ -1.5
UBE3AQ05086 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.71□□□□□ -1.5
UBE3AQ05086 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.71□□□□□ -1.5
UBE3AQ05086 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
UBE3AQ05086 SMG1P7-201ENST00000565246 2704 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms