Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MUC2-202ENST00000613187 4845 ntBASIC4.47□□□□□ -1.69
CX3CL1P78423 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CL1P78423 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CX3CL1P78423 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.46□□□□□ -1.69
CX3CL1P78423 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
CX3CL1P78423 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CX3CL1P78423 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CL1P78423 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CL1P78423 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CX3CL1P78423 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CX3CL1P78423 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CL1P78423 Z95331.1-201ENST00000623075 23112 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CX3CL1P78423 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CL1P78423 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CL1P78423 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CL1P78423 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CL1P78423 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 AL121886.1-201ENST00000358609 435 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 RNU6-249P-201ENST00000363016 102 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 RNA5SP284-201ENST00000384547 118 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 OR2AT2P-201ENST00000413438 905 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.46□□□□□ -1.7
CX3CL1P78423 TCEA1P4-201ENST00000415066 844 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CL1P78423 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 GNG5P5-201ENST00000420444 220 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CL1P78423 RPL34P3-201ENST00000421454 338 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 OR5M12P-201ENST00000423388 929 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CL1P78423 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CX3CL1P78423 AL662874.1-201ENST00000426065 230 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 AC009784.1-201ENST00000426484 460 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 ARF4P4-201ENST00000439608 520 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 AC000041.1-201ENST00000439655 175 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 NANOGP9-201ENST00000439890 892 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CL1P78423 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.46□□□□□ -1.7
CX3CL1P78423 CASP3P1-201ENST00000446037 609 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 AC008280.2-201ENST00000455473 307 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 GTF2IP12-201ENST00000456547 356 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 SNORD125-201ENST00000459538 96 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 AC007998.1-201ENST00000474156 672 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.46□□□□□ -1.7
CX3CL1P78423 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CL1P78423 RPS27AP16-201ENST00000492222 470 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CL1P78423 AC109481.1-201ENST00000509173 282 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 SNORA43.3-201ENST00000517240 103 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.46□□□□□ -1.7
CX3CL1P78423 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CL1P78423 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CL1P78423 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CL1P78423 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CL1P78423 AC011611.5-201ENST00000552477 578 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CL1P78423 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CX3CL1P78423 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CL1P78423 AC084759.1-201ENST00000561168 290 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CL1P78423 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.46□□□□□ -1.7
CX3CL1P78423 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.46□□□□□ -1.7
CX3CL1P78423 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CX3CL1P78423 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CX3CL1P78423 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.46□□□□□ -1.7
CX3CL1P78423 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CL1P78423 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.46□□□□□ -1.7
CX3CL1P78423 AC027449.1-201ENST00000608890 407 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 Z95327.3-201ENST00000610385 572 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 AL669942.2-201ENST00000620352 697 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.46□□□□□ -1.7
CX3CL1P78423 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CL1P78423 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.46□□□□□ -1.7
CX3CL1P78423 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.46□□□□□ -1.7
CX3CL1P78423 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CL1P78423 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CL1P78423 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
CX3CL1P78423 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CL1P78423 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CL1P78423 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CL1P78423 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CL1P78423 AC068870.1-201ENST00000563737 2455 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CL1P78423 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CL1P78423 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.46□□□□□ -1.7
CX3CL1P78423 AC144833.1-201ENST00000567953 4089 ntBASIC4.46□□□□□ -1.7
CX3CL1P78423 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CX3CL1P78423 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
CX3CL1P78423 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CX3CL1P78423 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CX3CL1P78423 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CX3CL1P78423 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms