Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
RAE1P78406 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.24□□□□□ -1.57
RAE1P78406 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RAE1P78406 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RAE1P78406 RNA5SP27-201ENST00000363839 119 ntBASIC5.24□□□□□ -1.57
RAE1P78406 RNU4-51P-201ENST00000364206 140 ntBASIC5.24□□□□□ -1.57
RAE1P78406 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.24□□□□□ -1.57
RAE1P78406 Y_RNA.578-201ENST00000390903 88 ntBASIC5.24□□□□□ -1.57
RAE1P78406 SNORD65C-201ENST00000390962 71 ntBASIC5.24□□□□□ -1.57
RAE1P78406 MCTS2P-201ENST00000394552 546 ntBASIC5.24□□□□□ -1.57
RAE1P78406 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RAE1P78406 GPS2P1-201ENST00000411761 986 ntBASIC5.24□□□□□ -1.57
RAE1P78406 RPS7P9-201ENST00000414704 586 ntBASIC5.24□□□□□ -1.57
RAE1P78406 HMGB1P49-201ENST00000418882 569 ntBASIC5.24□□□□□ -1.57
RAE1P78406 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RAE1P78406 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.24□□□□□ -1.57
RAE1P78406 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.24□□□□□ -1.57
RAE1P78406 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.24□□□□□ -1.57
RAE1P78406 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.24□□□□□ -1.57
RAE1P78406 AL161722.1-201ENST00000446972 1032 ntBASIC5.24□□□□□ -1.57
RAE1P78406 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 AL050341.1-201ENST00000447743 313 ntBASIC5.24□□□□□ -1.57
RAE1P78406 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RAE1P78406 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.24□□□□□ -1.57
RAE1P78406 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.24□□□□□ -1.57
RAE1P78406 AC244505.3-201ENST00000454598 187 ntBASIC5.24□□□□□ -1.57
RAE1P78406 RPL7P32-201ENST00000457119 744 ntBASIC5.24□□□□□ -1.57
RAE1P78406 PSAT1P4-201ENST00000466500 526 ntBASIC5.24□□□□□ -1.57
RAE1P78406 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.24□□□□□ -1.57
RAE1P78406 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.24□□□□□ -1.57
RAE1P78406 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.24□□□□□ -1.57
RAE1P78406 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.24□□□□□ -1.57
RAE1P78406 SCARNA20.4-201ENST00000516969 131 ntBASIC5.24□□□□□ -1.57
RAE1P78406 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.24□□□□□ -1.57
RAE1P78406 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.24□□□□□ -1.57
RAE1P78406 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.24□□□□□ -1.57
RAE1P78406 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
RAE1P78406 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.24□□□□□ -1.57
RAE1P78406 AC023050.2-201ENST00000544968 387 ntBASIC5.24□□□□□ -1.57
RAE1P78406 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.24□□□□□ -1.57
RAE1P78406 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.24□□□□□ -1.57
RAE1P78406 AC079600.1-201ENST00000550326 297 ntBASIC5.24□□□□□ -1.57
RAE1P78406 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.24□□□□□ -1.57
RAE1P78406 AL132657.2-201ENST00000564417 358 ntBASIC5.24□□□□□ -1.57
RAE1P78406 MRPS21P7-201ENST00000566937 238 ntBASIC5.24□□□□□ -1.57
RAE1P78406 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.24□□□□□ -1.57
RAE1P78406 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.24□□□□□ -1.57
RAE1P78406 AP005403.1-201ENST00000579720 229 ntBASIC5.24□□□□□ -1.57
RAE1P78406 AP002884.5-201ENST00000595053 1132 ntBASIC5.24□□□□□ -1.57
RAE1P78406 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.24□□□□□ -1.57
RAE1P78406 PCNAP1-202ENST00000595299 752 ntBASIC5.24□□□□□ -1.57
RAE1P78406 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.24□□□□□ -1.57
RAE1P78406 AC100767.2-201ENST00000604840 693 ntBASIC5.24□□□□□ -1.57
RAE1P78406 AC107952.2-201ENST00000606048 486 ntBASIC5.24□□□□□ -1.57
RAE1P78406 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.24□□□□□ -1.57
RAE1P78406 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
RAE1P78406 AC004777.1-201ENST00000624317 287 ntBASIC5.24□□□□□ -1.57
RAE1P78406 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.24□□□□□ -1.57
RAE1P78406 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RAE1P78406 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.24□□□□□ -1.57
RAE1P78406 AC119674.1-212ENST00000641155 993 ntBASIC5.24□□□□□ -1.57
RAE1P78406 AC073869.8-201ENST00000641806 335 ntBASIC5.24□□□□□ -1.57
RAE1P78406 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.24□□□□□ -1.57
RAE1P78406 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.24□□□□□ -1.57
RAE1P78406 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.24□□□□□ -1.57
RAE1P78406 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAE1P78406 AL121950.1-201ENST00000624993 2077 ntBASIC5.24□□□□□ -1.57
RAE1P78406 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RAE1P78406 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RAE1P78406 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAE1P78406 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.23□□□□□ -1.57
RAE1P78406 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.23□□□□□ -1.57
RAE1P78406 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAE1P78406 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RAE1P78406 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAE1P78406 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RAE1P78406 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAE1P78406 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAE1P78406 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.23□□□□□ -1.57
RAE1P78406 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAE1P78406 RN7SKP292-201ENST00000365522 317 ntBASIC5.23□□□□□ -1.57
RAE1P78406 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAE1P78406 SNORD56.6-201ENST00000384569 71 ntBASIC5.23□□□□□ -1.57
RAE1P78406 RNU6-636P-201ENST00000384598 107 ntBASIC5.23□□□□□ -1.57
RAE1P78406 RNU6-244P-201ENST00000391028 104 ntBASIC5.23□□□□□ -1.57
RAE1P78406 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RAE1P78406 RPS27AP11-201ENST00000402798 447 ntBASIC5.23□□□□□ -1.57
RAE1P78406 AP000357.1-201ENST00000409926 1165 ntBASIC5.23□□□□□ -1.57
RAE1P78406 AL513175.2-201ENST00000422071 443 ntBASIC5.23□□□□□ -1.57
RAE1P78406 AL133173.1-201ENST00000423458 397 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms