Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RPL36AP15-201ENST00000444514 266 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNA1P78396 CYCSP42-201ENST00000450823 238 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.7□□□□□ -1.5
CCNA1P78396 TAAR4P-201ENST00000454843 1039 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.7□□□□□ -1.5
CCNA1P78396 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNA1P78396 SOX5P1-201ENST00000524155 1127 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.7□□□□□ -1.5
CCNA1P78396 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.7□□□□□ -1.5
CCNA1P78396 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.7□□□□□ -1.5
CCNA1P78396 AC010487.1-201ENST00000594408 1172 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNA1P78396 RPL26P30-202ENST00000602923 645 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 MIR6133-201ENST00000617057 108 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 AC019206.1-201ENST00000621938 425 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNA1P78396 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.7□□□□□ -1.5
CCNA1P78396 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCNA1P78396 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CCNA1P78396 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCNA1P78396 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CCNA1P78396 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNA1P78396 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCNA1P78396 AC027228.2-201ENST00000567141 2154 ntBASIC5.7□□□□□ -1.5
CCNA1P78396 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCNA1P78396 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCNA1P78396 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCNA1P78396 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.7□□□□□ -1.5
CCNA1P78396 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.7□□□□□ -1.5
CCNA1P78396 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCNA1P78396 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.69□□□□□ -1.5
CCNA1P78396 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNA1P78396 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCNA1P78396 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCNA1P78396 SAMM50P1-201ENST00000455403 1399 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNA1P78396 CUL4AP1-201ENST00000514750 1863 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 ECM1P2-201ENST00000503354 1577 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCNA1P78396 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.69□□□□□ -1.5
CCNA1P78396 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.69□□□□□ -1.5
CCNA1P78396 SNORA70.10-201ENST00000384515 134 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCNA1P78396 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCNA1P78396 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNA1P78396 RPL18P10-201ENST00000425606 538 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.69□□□□□ -1.5
CCNA1P78396 TXNP2-201ENST00000443918 295 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.69□□□□□ -1.5
CCNA1P78396 AC023271.1-201ENST00000445936 1090 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 AC012512.1-201ENST00000446594 718 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.69□□□□□ -1.5
CCNA1P78396 AC068587.1-201ENST00000483613 781 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 AC116562.1-201ENST00000485355 781 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 RN7SL441P-201ENST00000492388 296 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 AC111000.3-201ENST00000508057 576 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNA1P78396 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.69□□□□□ -1.5
CCNA1P78396 AC012339.2-201ENST00000523996 453 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.69□□□□□ -1.5
CCNA1P78396 DUX4L52-201ENST00000549363 777 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 RN7SL690P-201ENST00000582087 240 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNA1P78396 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCNA1P78396 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNA1P78396 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCNA1P78396 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.69□□□□□ -1.5
CCNA1P78396 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCNA1P78396 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCNA1P78396 AL606537.1-201ENST00000607258 2011 ntBASIC5.69□□□□□ -1.5
CCNA1P78396 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCNA1P78396 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCNA1P78396 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.68□□□□□ -1.5
CCNA1P78396 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.68□□□□□ -1.5
CCNA1P78396 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.68□□□□□ -1.5
CCNA1P78396 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.68□□□□□ -1.5
CCNA1P78396 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCNA1P78396 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.68□□□□□ -1.5
CCNA1P78396 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCNA1P78396 PEX12P1-201ENST00000400284 1048 ntBASIC5.68□□□□□ -1.5
CCNA1P78396 AC114755.2-201ENST00000413520 361 ntBASIC5.68□□□□□ -1.5
CCNA1P78396 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.68□□□□□ -1.5
CCNA1P78396 AC106901.1-201ENST00000425086 698 ntBASIC5.68□□□□□ -1.5
CCNA1P78396 RPL5P2-201ENST00000429598 854 ntBASIC5.68□□□□□ -1.5
CCNA1P78396 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.68□□□□□ -1.5
CCNA1P78396 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.68□□□□□ -1.5
CCNA1P78396 AC005154.2-201ENST00000438110 379 ntBASIC5.68□□□□□ -1.5
CCNA1P78396 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.68□□□□□ -1.5
CCNA1P78396 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.68□□□□□ -1.5
CCNA1P78396 AP002371.1-201ENST00000463604 433 ntBASIC5.68□□□□□ -1.5
CCNA1P78396 AL672167.3-201ENST00000465951 960 ntBASIC5.68□□□□□ -1.5
CCNA1P78396 RPS23P7-201ENST00000466210 444 ntBASIC5.68□□□□□ -1.5
CCNA1P78396 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.68□□□□□ -1.5
CCNA1P78396 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.68□□□□□ -1.5
CCNA1P78396 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.68□□□□□ -1.5
CCNA1P78396 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.68□□□□□ -1.5
CCNA1P78396 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.68□□□□□ -1.5
CCNA1P78396 AC019322.1-201ENST00000571869 389 ntBASIC5.68□□□□□ -1.5
CCNA1P78396 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms