Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.75□□□□□ -1.65
VSX2P58304 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.75□□□□□ -1.65
VSX2P58304 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.75□□□□□ -1.65
VSX2P58304 AC008033.2-201ENST00000542626 177 ntBASIC4.75□□□□□ -1.65
VSX2P58304 SETP1-201ENST00000556014 845 ntBASIC4.75□□□□□ -1.65
VSX2P58304 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.75□□□□□ -1.65
VSX2P58304 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.75□□□□□ -1.65
VSX2P58304 AC073575.2-201ENST00000614212 627 ntBASIC4.75□□□□□ -1.65
VSX2P58304 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.75□□□□□ -1.65
VSX2P58304 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VSX2P58304 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VSX2P58304 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
VSX2P58304 AP000542.2-201ENST00000623199 6179 ntBASIC4.75□□□□□ -1.65
VSX2P58304 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.75□□□□□ -1.65
VSX2P58304 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VSX2P58304 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.75□□□□□ -1.65
VSX2P58304 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VSX2P58304 ECM1P2-201ENST00000503354 1577 ntBASIC4.74□□□□□ -1.65
VSX2P58304 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VSX2P58304 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.74□□□□□ -1.65
VSX2P58304 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VSX2P58304 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
VSX2P58304 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.74□□□□□ -1.65
VSX2P58304 NEAT1-202ENST00000501122 22743 ntBASIC4.74□□□□□ -1.65
VSX2P58304 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VSX2P58304 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
VSX2P58304 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VSX2P58304 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VSX2P58304 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VSX2P58304 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
VSX2P58304 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.74□□□□□ -1.65
VSX2P58304 LRRC37BP1-201ENST00000398851 714 ntBASIC4.74□□□□□ -1.65
VSX2P58304 AC104837.2-201ENST00000427236 424 ntBASIC4.74□□□□□ -1.65
VSX2P58304 RPL34P6-201ENST00000432390 345 ntBASIC4.74□□□□□ -1.65
VSX2P58304 RPL7P11-201ENST00000437586 658 ntBASIC4.74□□□□□ -1.65
VSX2P58304 AL450023.3-201ENST00000440592 271 ntBASIC4.74□□□□□ -1.65
VSX2P58304 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.74□□□□□ -1.65
VSX2P58304 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.74□□□□□ -1.65
VSX2P58304 RNA5SP103-201ENST00000459503 118 ntBASIC4.74□□□□□ -1.65
VSX2P58304 RPL35AP28-201ENST00000459730 331 ntBASIC4.74□□□□□ -1.65
VSX2P58304 RPS3AP41-201ENST00000462701 778 ntBASIC4.74□□□□□ -1.65
VSX2P58304 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.74□□□□□ -1.65
VSX2P58304 RPL7P16-201ENST00000479738 738 ntBASIC4.74□□□□□ -1.65
VSX2P58304 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VSX2P58304 AC138409.2-202ENST00000507274 458 ntBASIC4.74□□□□□ -1.65
VSX2P58304 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.74□□□□□ -1.65
VSX2P58304 RN7SKP5-201ENST00000517045 272 ntBASIC4.74□□□□□ -1.65
VSX2P58304 BRD9P1-201ENST00000529855 560 ntBASIC4.74□□□□□ -1.65
VSX2P58304 AC021006.3-201ENST00000530771 192 ntBASIC4.74□□□□□ -1.65
VSX2P58304 OR5D15P-201ENST00000531671 942 ntBASIC4.74□□□□□ -1.65
VSX2P58304 AL512310.9-201ENST00000553311 948 ntBASIC4.74□□□□□ -1.65
VSX2P58304 EDDM3DP-201ENST00000554692 434 ntBASIC4.74□□□□□ -1.65
VSX2P58304 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.74□□□□□ -1.65
VSX2P58304 AC040958.1-201ENST00000561102 201 ntBASIC4.74□□□□□ -1.65
VSX2P58304 Mico1.1-201ENST00000611698 204 ntBASIC4.74□□□□□ -1.65
VSX2P58304 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.74□□□□□ -1.65
VSX2P58304 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.74□□□□□ -1.65
VSX2P58304 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VSX2P58304 AC099654.2-201ENST00000433031 1980 ntBASIC4.74□□□□□ -1.65
VSX2P58304 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
VSX2P58304 BTBD10P1-201ENST00000549824 1352 ntBASIC4.74□□□□□ -1.65
VSX2P58304 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.74□□□□□ -1.65
VSX2P58304 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.74□□□□□ -1.65
VSX2P58304 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.74□□□□□ -1.65
VSX2P58304 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
VSX2P58304 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.73□□□□□ -1.65
VSX2P58304 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.73□□□□□ -1.65
VSX2P58304 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
VSX2P58304 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.73□□□□□ -1.65
VSX2P58304 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.73□□□□□ -1.65
VSX2P58304 AC100778.3-201ENST00000580060 1750 ntBASIC4.73□□□□□ -1.65
VSX2P58304 AC011503.2-201ENST00000594230 1500 ntBASIC4.73□□□□□ -1.65
VSX2P58304 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.73□□□□□ -1.65
VSX2P58304 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VSX2P58304 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VSX2P58304 RN7SKP103-201ENST00000363848 320 ntBASIC4.73□□□□□ -1.65
VSX2P58304 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VSX2P58304 SNORA81-201ENST00000408493 178 ntBASIC4.73□□□□□ -1.65
VSX2P58304 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.73□□□□□ -1.65
VSX2P58304 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.73□□□□□ -1.65
VSX2P58304 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.73□□□□□ -1.65
VSX2P58304 RPL12P43-201ENST00000420608 499 ntBASIC4.73□□□□□ -1.65
VSX2P58304 AL772161.1-201ENST00000439130 476 ntBASIC4.73□□□□□ -1.65
VSX2P58304 RPL7AP61-201ENST00000443410 636 ntBASIC4.73□□□□□ -1.65
VSX2P58304 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.73□□□□□ -1.65
VSX2P58304 RPL31P44-201ENST00000447680 377 ntBASIC4.73□□□□□ -1.65
VSX2P58304 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.73□□□□□ -1.65
VSX2P58304 RPS3AP53-201ENST00000454716 778 ntBASIC4.73□□□□□ -1.65
VSX2P58304 RNU7-157P-201ENST00000459600 66 ntBASIC4.73□□□□□ -1.65
VSX2P58304 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.73□□□□□ -1.65
VSX2P58304 AC112184.1-201ENST00000505179 312 ntBASIC4.73□□□□□ -1.65
VSX2P58304 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.73□□□□□ -1.65
VSX2P58304 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.73□□□□□ -1.65
VSX2P58304 GCSHP4-201ENST00000538792 439 ntBASIC4.73□□□□□ -1.65
VSX2P58304 AC006349.1-201ENST00000555526 235 ntBASIC4.73□□□□□ -1.65
VSX2P58304 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.73□□□□□ -1.65
VSX2P58304 TVP23CP2-201ENST00000571473 623 ntBASIC4.73□□□□□ -1.65
VSX2P58304 AC087783.2-201ENST00000605070 562 ntBASIC4.73□□□□□ -1.65
VSX2P58304 AC005084.1-201ENST00000605160 304 ntBASIC4.73□□□□□ -1.65
VSX2P58304 AL049539.1-201ENST00000611964 459 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms