Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC068446.1-201ENST00000556425 1549 ntBASIC5.58□□□□□ -1.52
HMGCS2P54868 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HMGCS2P54868 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HMGCS2P54868 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGCS2P54868 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGCS2P54868 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
HMGCS2P54868 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS2P54868 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS2P54868 AC108751.5-201ENST00000492880 1336 ntBASIC5.58□□□□□ -1.52
HMGCS2P54868 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS2P54868 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS2P54868 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HMGCS2P54868 RNA5SP397-201ENST00000391323 118 ntBASIC5.58□□□□□ -1.52
HMGCS2P54868 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGCS2P54868 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HMGCS2P54868 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGCS2P54868 QRSL1P2-201ENST00000418582 964 ntBASIC5.58□□□□□ -1.52
HMGCS2P54868 LINC00993-201ENST00000420453 540 ntBASIC5.58□□□□□ -1.52
HMGCS2P54868 AL592293.2-201ENST00000422292 996 ntBASIC5.58□□□□□ -1.52
HMGCS2P54868 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS2P54868 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGCS2P54868 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGCS2P54868 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGCS2P54868 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGCS2P54868 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGCS2P54868 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.58□□□□□ -1.52
HMGCS2P54868 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS2P54868 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.58□□□□□ -1.52
HMGCS2P54868 AC018695.5-201ENST00000605872 315 ntBASIC5.58□□□□□ -1.52
HMGCS2P54868 AC009950.2-201ENST00000636548 183 ntBASIC5.58□□□□□ -1.52
HMGCS2P54868 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HMGCS2P54868 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HMGCS2P54868 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGCS2P54868 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS2P54868 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS2P54868 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS2P54868 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HMGCS2P54868 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
HMGCS2P54868 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGCS2P54868 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS2P54868 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGCS2P54868 AC083843.2-201ENST00000568248 6253 ntBASIC5.58□□□□□ -1.52
HMGCS2P54868 ZNF402P-201ENST00000404435 3100 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 TLK1P1-201ENST00000456760 2440 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS2P54868 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS2P54868 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
HMGCS2P54868 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGCS2P54868 AC025574.1-201ENST00000554784 1653 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 AL592148.3-201ENST00000608771 2646 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS2P54868 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGCS2P54868 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS2P54868 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
HMGCS2P54868 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCS2P54868 RNU1-82P-201ENST00000390851 165 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HMGCS2P54868 RNU4-25P-201ENST00000410569 230 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 AL354868.1-201ENST00000417077 482 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 RPL12P28-201ENST00000430852 489 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCS2P54868 RPS17P8-201ENST00000434525 335 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 AL136455.1-201ENST00000441083 1240 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 AC090589.1-201ENST00000473109 362 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGCS2P54868 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.57□□□□□ -1.52
HMGCS2P54868 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGCS2P54868 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCS2P54868 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGCS2P54868 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCS2P54868 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.57□□□□□ -1.52
HMGCS2P54868 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGCS2P54868 AC068831.8-201ENST00000620171 435 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGCS2P54868 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS2P54868 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS2P54868 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
HMGCS2P54868 AC004656.1-201ENST00000568479 4951 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS2P54868 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS2P54868 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS2P54868 AC007382.1-201ENST00000624376 2618 ntBASIC5.57□□□□□ -1.52
HMGCS2P54868 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGCS2P54868 MAPK10-338ENST00000641647 3362 ntBASIC5.56□□□□□ -1.52
HMGCS2P54868 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS2P54868 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGCS2P54868 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCS2P54868 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCS2P54868 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HMGCS2P54868 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HMGCS2P54868 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGCS2P54868 SMC4P1-201ENST00000414479 527 ntBASIC5.56□□□□□ -1.52
HMGCS2P54868 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGCS2P54868 RPL12P34-201ENST00000424532 479 ntBASIC5.56□□□□□ -1.52
HMGCS2P54868 AC234779.1-201ENST00000425910 285 ntBASIC5.56□□□□□ -1.52
HMGCS2P54868 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGCS2P54868 NPM1P18-201ENST00000434232 732 ntBASIC5.56□□□□□ -1.52
HMGCS2P54868 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGCS2P54868 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms