Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.33□□□□□ -1.4
EPHB3P54753 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHB3P54753 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 AC092692.1-201ENST00000623625 2595 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.32□□□□□ -1.4
EPHB3P54753 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.32□□□□□ -1.4
EPHB3P54753 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHB3P54753 AL078595.2-201ENST00000605309 1780 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHB3P54753 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
EPHB3P54753 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.32□□□□□ -1.4
EPHB3P54753 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 RNU1-150P-201ENST00000362491 162 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 Y_RNA.41-201ENST00000362646 102 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 RN7SKP292-201ENST00000365522 317 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 U6.112-201ENST00000384129 70 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
EPHB3P54753 AC016739.1-201ENST00000405359 345 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHB3P54753 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.32□□□□□ -1.4
EPHB3P54753 NMD3P2-201ENST00000421815 761 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.32□□□□□ -1.4
EPHB3P54753 MGAT2P2-201ENST00000427194 797 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 HIGD1AP12-201ENST00000427832 281 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 AL596276.1-201ENST00000434465 418 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHB3P54753 AC009263.1-201ENST00000441193 1239 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHB3P54753 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHB3P54753 RPL36AP39-201ENST00000445859 318 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 CASP3P1-201ENST00000446037 609 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 HMGN1P36-201ENST00000446623 298 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 RHEBP2-201ENST00000450289 600 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 RPS27AP3-201ENST00000453803 454 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHB3P54753 AL109741.2-201ENST00000455561 343 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 AC103563.5-201ENST00000455643 364 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHB3P54753 AC026348.1-201ENST00000462549 1053 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 AL603882.1-201ENST00000463059 681 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 RN7SL352P-201ENST00000466002 277 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 MTCO3P38-201ENST00000468910 766 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 UBFD1P1-201ENST00000473259 814 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 AC135999.1-201ENST00000478962 479 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 RN7SL273P-201ENST00000481561 299 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHB3P54753 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHB3P54753 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHB3P54753 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHB3P54753 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHB3P54753 AC112191.2-201ENST00000522428 333 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 OR4A40P-201ENST00000533878 948 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 AC016957.1-201ENST00000534895 309 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHB3P54753 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHB3P54753 VN1R83P-201ENST00000595685 445 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.32□□□□□ -1.4
EPHB3P54753 AP000894.4-201ENST00000610185 483 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 AC095031.1-201ENST00000623685 672 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHB3P54753 AL603750.1-201ENST00000624216 1717 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHB3P54753 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
EPHB3P54753 AC009779.8-201ENST00000641684 4384 ntBASIC6.32□□□□□ -1.4
EPHB3P54753 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
EPHB3P54753 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHB3P54753 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHB3P54753 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
EPHB3P54753 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHB3P54753 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHB3P54753 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHB3P54753 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.32□□□□□ -1.4
EPHB3P54753 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHB3P54753 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
EPHB3P54753 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
EPHB3P54753 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHB3P54753 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHB3P54753 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHB3P54753 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
EPHB3P54753 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHB3P54753 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.31□□□□□ -1.4
EPHB3P54753 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
EPHB3P54753 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
EPHB3P54753 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
EPHB3P54753 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
EPHB3P54753 SELENOWP1-201ENST00000322792 252 ntBASIC6.31□□□□□ -1.4
EPHB3P54753 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms