Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC009163.6-201ENST00000612367 342 ntBASIC4.4□□□□□ -1.71
SRP9P49458 AC009704.2-201ENST00000618739 483 ntBASIC4.4□□□□□ -1.71
SRP9P49458 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
SRP9P49458 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.4□□□□□ -1.71
SRP9P49458 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.4□□□□□ -1.71
SRP9P49458 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SRP9P49458 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
SRP9P49458 AC235565.1-201ENST00000456962 1325 ntBASIC4.4□□□□□ -1.71
SRP9P49458 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.4□□□□□ -1.71
SRP9P49458 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SRP9P49458 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SRP9P49458 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SRP9P49458 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SRP9P49458 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SRP9P49458 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SRP9P49458 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SRP9P49458 U3.2-201ENST00000362981 210 ntBASIC4.39□□□□□ -1.71
SRP9P49458 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.39□□□□□ -1.71
SRP9P49458 RNU4-34P-201ENST00000410431 124 ntBASIC4.39□□□□□ -1.71
SRP9P49458 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.39□□□□□ -1.71
SRP9P49458 TMBIM7P-201ENST00000418074 855 ntBASIC4.39□□□□□ -1.71
SRP9P49458 AL034379.1-201ENST00000423216 253 ntBASIC4.39□□□□□ -1.71
SRP9P49458 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.39□□□□□ -1.71
SRP9P49458 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.39□□□□□ -1.71
SRP9P49458 MYO5BP2-201ENST00000449815 1277 ntBASIC4.39□□□□□ -1.71
SRP9P49458 NPM1P39-201ENST00000449818 867 ntBASIC4.39□□□□□ -1.71
SRP9P49458 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SRP9P49458 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.39□□□□□ -1.71
SRP9P49458 RN7SL222P-201ENST00000476452 299 ntBASIC4.39□□□□□ -1.71
SRP9P49458 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.39□□□□□ -1.71
SRP9P49458 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.39□□□□□ -1.71
SRP9P49458 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.39□□□□□ -1.71
SRP9P49458 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.39□□□□□ -1.71
SRP9P49458 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.39□□□□□ -1.71
SRP9P49458 RNA5SP92-201ENST00000516437 110 ntBASIC4.39□□□□□ -1.71
SRP9P49458 NPM1P6-201ENST00000521088 871 ntBASIC4.39□□□□□ -1.71
SRP9P49458 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.39□□□□□ -1.71
SRP9P49458 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.39□□□□□ -1.71
SRP9P49458 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.39□□□□□ -1.71
SRP9P49458 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.39□□□□□ -1.71
SRP9P49458 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.39□□□□□ -1.71
SRP9P49458 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.39□□□□□ -1.71
SRP9P49458 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.39□□□□□ -1.71
SRP9P49458 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.39□□□□□ -1.71
SRP9P49458 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.39□□□□□ -1.71
SRP9P49458 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.39□□□□□ -1.71
SRP9P49458 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.39□□□□□ -1.71
SRP9P49458 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.39□□□□□ -1.71
SRP9P49458 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.39□□□□□ -1.71
SRP9P49458 SNORD91B-202ENST00000608459 222 ntBASIC4.39□□□□□ -1.71
SRP9P49458 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.39□□□□□ -1.71
SRP9P49458 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.39□□□□□ -1.71
SRP9P49458 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.39□□□□□ -1.71
SRP9P49458 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SRP9P49458 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SRP9P49458 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SRP9P49458 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.39□□□□□ -1.71
SRP9P49458 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRP9P49458 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SRP9P49458 PANDAR-201ENST00000629595 1506 ntBASIC4.38□□□□□ -1.71
SRP9P49458 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRP9P49458 MIPEPP2-201ENST00000422560 1819 ntBASIC4.38□□□□□ -1.71
SRP9P49458 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SRP9P49458 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SRP9P49458 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRP9P49458 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.38□□□□□ -1.71
SRP9P49458 RNU6-171P-201ENST00000384354 107 ntBASIC4.38□□□□□ -1.71
SRP9P49458 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SRP9P49458 AL592291.1-201ENST00000403830 352 ntBASIC4.38□□□□□ -1.71
SRP9P49458 U3.36-201ENST00000408418 213 ntBASIC4.38□□□□□ -1.71
SRP9P49458 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.38□□□□□ -1.71
SRP9P49458 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.38□□□□□ -1.71
SRP9P49458 AC004980.3-201ENST00000447046 365 ntBASIC4.38□□□□□ -1.71
SRP9P49458 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.38□□□□□ -1.71
SRP9P49458 RN7SL443P-201ENST00000464331 290 ntBASIC4.38□□□□□ -1.71
SRP9P49458 RN7SL177P-201ENST00000476596 299 ntBASIC4.38□□□□□ -1.71
SRP9P49458 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.38□□□□□ -1.71
SRP9P49458 AC097173.1-201ENST00000505862 819 ntBASIC4.38□□□□□ -1.71
SRP9P49458 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.38□□□□□ -1.71
SRP9P49458 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SRP9P49458 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SRP9P49458 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.38□□□□□ -1.71
SRP9P49458 AC011447.4-201ENST00000587562 111 ntBASIC4.38□□□□□ -1.71
SRP9P49458 AL353600.1-201ENST00000608148 251 ntBASIC4.38□□□□□ -1.71
SRP9P49458 AL512624.1-201ENST00000613638 469 ntBASIC4.38□□□□□ -1.71
SRP9P49458 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.38□□□□□ -1.71
SRP9P49458 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SRP9P49458 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.38□□□□□ -1.71
SRP9P49458 AC091046.3-201ENST00000631455 1574 ntBASIC4.38□□□□□ -1.71
SRP9P49458 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
SRP9P49458 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SRP9P49458 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRP9P49458 AL450326.2-201ENST00000421913 1962 ntBASIC4.38□□□□□ -1.71
SRP9P49458 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SRP9P49458 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SRP9P49458 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.37□□□□□ -1.71
SRP9P49458 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.37□□□□□ -1.71
SRP9P49458 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.37□□□□□ -1.71
SRP9P49458 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SRP9P49458 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms