Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AL512422.1-201ENST00000407033 553 ntBASIC5.57□□□□□ -1.52
USP8P40818 NPM1P4-201ENST00000414095 812 ntBASIC5.57□□□□□ -1.52
USP8P40818 CHEK2P5-201ENST00000423877 246 ntBASIC5.57□□□□□ -1.52
USP8P40818 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.57□□□□□ -1.52
USP8P40818 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.57□□□□□ -1.52
USP8P40818 SDR42E1P3-201ENST00000438345 502 ntBASIC5.57□□□□□ -1.52
USP8P40818 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.57□□□□□ -1.52
USP8P40818 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.57□□□□□ -1.52
USP8P40818 OR2AO1P-201ENST00000476497 403 ntBASIC5.57□□□□□ -1.52
USP8P40818 RN7SL101P-201ENST00000496350 279 ntBASIC5.57□□□□□ -1.52
USP8P40818 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.57□□□□□ -1.52
USP8P40818 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP8P40818 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.57□□□□□ -1.52
USP8P40818 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP8P40818 GTF2F2P1-201ENST00000511083 675 ntBASIC5.57□□□□□ -1.52
USP8P40818 RPL7L1P4-201ENST00000513004 707 ntBASIC5.57□□□□□ -1.52
USP8P40818 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.57□□□□□ -1.52
USP8P40818 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.57□□□□□ -1.52
USP8P40818 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.57□□□□□ -1.52
USP8P40818 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP8P40818 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP8P40818 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP8P40818 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP8P40818 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.57□□□□□ -1.52
USP8P40818 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.57□□□□□ -1.52
USP8P40818 AC037198.3-201ENST00000616754 526 ntBASIC5.57□□□□□ -1.52
USP8P40818 AC118658.2-201ENST00000618697 459 ntBASIC5.57□□□□□ -1.52
USP8P40818 AP002371.2-201ENST00000624450 503 ntBASIC5.57□□□□□ -1.52
USP8P40818 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.57□□□□□ -1.52
USP8P40818 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
USP8P40818 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP8P40818 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP8P40818 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.57□□□□□ -1.52
USP8P40818 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP8P40818 AC097461.1-201ENST00000568928 2821 ntBASIC5.56□□□□□ -1.52
USP8P40818 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP8P40818 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.56□□□□□ -1.52
USP8P40818 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.56□□□□□ -1.52
USP8P40818 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP8P40818 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP8P40818 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP8P40818 Y_RNA.110-201ENST00000363220 99 ntBASIC5.56□□□□□ -1.52
USP8P40818 RNA5SP435-201ENST00000364044 108 ntBASIC5.56□□□□□ -1.52
USP8P40818 RNU6-819P-201ENST00000364116 107 ntBASIC5.56□□□□□ -1.52
USP8P40818 RNU1-74P-201ENST00000384108 171 ntBASIC5.56□□□□□ -1.52
USP8P40818 AC013442.1-201ENST00000397347 228 ntBASIC5.56□□□□□ -1.52
USP8P40818 AL035079.1-201ENST00000405210 287 ntBASIC5.56□□□□□ -1.52
USP8P40818 AL390316.1-201ENST00000406279 553 ntBASIC5.56□□□□□ -1.52
USP8P40818 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.56□□□□□ -1.52
USP8P40818 PTP4A1P1-201ENST00000420539 515 ntBASIC5.56□□□□□ -1.52
USP8P40818 AC093655.2-201ENST00000425735 631 ntBASIC5.56□□□□□ -1.52
USP8P40818 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.56□□□□□ -1.52
USP8P40818 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.56□□□□□ -1.52
USP8P40818 BX842559.2-201ENST00000451418 605 ntBASIC5.56□□□□□ -1.52
USP8P40818 AC016724.1-201ENST00000453215 421 ntBASIC5.56□□□□□ -1.52
USP8P40818 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.56□□□□□ -1.52
USP8P40818 Z92846.1-201ENST00000456203 268 ntBASIC5.56□□□□□ -1.52
USP8P40818 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.56□□□□□ -1.52
USP8P40818 PGAM1P13-201ENST00000507497 754 ntBASIC5.56□□□□□ -1.52
USP8P40818 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.56□□□□□ -1.52
USP8P40818 TCP11X3P-202ENST00000514289 1254 ntBASIC5.56□□□□□ -1.52
USP8P40818 RFPL4AP3-201ENST00000515267 345 ntBASIC5.56□□□□□ -1.52
USP8P40818 RNA5SP464-201ENST00000516251 108 ntBASIC5.56□□□□□ -1.52
USP8P40818 RN7SKP5-201ENST00000517045 272 ntBASIC5.56□□□□□ -1.52
USP8P40818 OR8K2P-201ENST00000524645 927 ntBASIC5.56□□□□□ -1.52
USP8P40818 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.56□□□□□ -1.52
USP8P40818 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.56□□□□□ -1.52
USP8P40818 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.56□□□□□ -1.52
USP8P40818 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.56□□□□□ -1.52
USP8P40818 AL049779.2-201ENST00000553847 315 ntBASIC5.56□□□□□ -1.52
USP8P40818 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP8P40818 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.56□□□□□ -1.52
USP8P40818 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.56□□□□□ -1.52
USP8P40818 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.56□□□□□ -1.52
USP8P40818 AC015802.5-201ENST00000607478 399 ntBASIC5.56□□□□□ -1.52
USP8P40818 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.56□□□□□ -1.52
USP8P40818 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.56□□□□□ -1.52
USP8P40818 AC135068.12-201ENST00000637370 931 ntBASIC5.56□□□□□ -1.52
USP8P40818 CASC19-264ENST00000641912 1184 ntBASIC5.56□□□□□ -1.52
USP8P40818 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP8P40818 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP8P40818 AC006210.2-201ENST00000367074 1545 ntBASIC5.56□□□□□ -1.52
USP8P40818 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP8P40818 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.56□□□□□ -1.52
USP8P40818 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.56□□□□□ -1.52
USP8P40818 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP8P40818 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP8P40818 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.55□□□□□ -1.52
USP8P40818 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.55□□□□□ -1.52
USP8P40818 AC235565.1-201ENST00000456962 1325 ntBASIC5.55□□□□□ -1.52
USP8P40818 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
USP8P40818 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.55□□□□□ -1.52
USP8P40818 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
USP8P40818 U3.3-201ENST00000362986 216 ntBASIC5.55□□□□□ -1.52
USP8P40818 RN7SKP162-201ENST00000363605 345 ntBASIC5.55□□□□□ -1.52
USP8P40818 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.55□□□□□ -1.52
USP8P40818 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP8P40818 GAPDHP15-201ENST00000398586 975 ntBASIC5.55□□□□□ -1.52
USP8P40818 OR1F12-201ENST00000402365 945 ntBASIC5.55□□□□□ -1.52
USP8P40818 AC013268.2-201ENST00000420753 337 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms