Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CNGA1P29973 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
CNGA1P29973 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CNGA1P29973 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
CNGA1P29973 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CNGA1P29973 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CNGA1P29973 SEC63P2-201ENST00000503863 1939 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 RNA5SP507-201ENST00000363603 121 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 MCTS2P-201ENST00000394552 546 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CNGA1P29973 MRPS21P2-201ENST00000424704 264 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 AC092648.1-201ENST00000425870 423 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 GTF2IP3-201ENST00000433887 494 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.55□□□□□ -1.36
CNGA1P29973 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.55□□□□□ -1.36
CNGA1P29973 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.55□□□□□ -1.36
CNGA1P29973 CUBNP2-201ENST00000443534 1139 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.55□□□□□ -1.36
CNGA1P29973 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.55□□□□□ -1.36
CNGA1P29973 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CNGA1P29973 OR7E116P-201ENST00000448529 957 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 AURKAPS1-201ENST00000451805 1212 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 ACA64.4-201ENST00000459070 127 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 RPL7P48-201ENST00000461513 746 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 RN7SL329P-201ENST00000467740 299 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 RN7SL51P-201ENST00000468230 285 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 SLC25A51P1-201ENST00000468432 871 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.55□□□□□ -1.36
CNGA1P29973 AC005412.2-201ENST00000492004 341 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 AC009120.1-201ENST00000493458 473 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 AC024558.1-201ENST00000505008 528 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.55□□□□□ -1.36
CNGA1P29973 AC104417.1-201ENST00000523974 751 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.55□□□□□ -1.36
CNGA1P29973 AC006518.2-201ENST00000542513 940 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.55□□□□□ -1.36
CNGA1P29973 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.55□□□□□ -1.36
CNGA1P29973 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.55□□□□□ -1.36
CNGA1P29973 AC068313.1-201ENST00000604028 1008 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 AC093424.1-201ENST00000604999 338 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 AC090510.2-201ENST00000617465 629 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 AC138907.10-201ENST00000623708 983 ntBASIC6.55□□□□□ -1.36
CNGA1P29973 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.55□□□□□ -1.36
CNGA1P29973 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CNGA1P29973 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
CNGA1P29973 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CNGA1P29973 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CNGA1P29973 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
CNGA1P29973 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
CNGA1P29973 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
CNGA1P29973 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CNGA1P29973 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CNGA1P29973 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CNGA1P29973 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CNGA1P29973 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CNGA1P29973 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.54□□□□□ -1.36
CNGA1P29973 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.54□□□□□ -1.36
CNGA1P29973 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CNGA1P29973 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CNGA1P29973 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CNGA1P29973 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CNGA1P29973 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CNGA1P29973 RBPJP2-201ENST00000618187 1444 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CNGA1P29973 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CNGA1P29973 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.54□□□□□ -1.36
CNGA1P29973 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.54□□□□□ -1.36
CNGA1P29973 RNU6-906P-201ENST00000384700 70 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 AC005042.1-201ENST00000393397 800 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 AL645927.1-201ENST00000396783 406 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.54□□□□□ -1.36
CNGA1P29973 AL357752.1-201ENST00000412817 349 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 RPS26P38-201ENST00000414476 348 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 MTND4P3-201ENST00000417829 541 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 AL133173.1-201ENST00000423458 397 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.54□□□□□ -1.36
CNGA1P29973 RPL7L1P9-201ENST00000431298 745 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.54□□□□□ -1.36
CNGA1P29973 FTH1P16-201ENST00000435241 552 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.54□□□□□ -1.36
CNGA1P29973 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.54□□□□□ -1.36
CNGA1P29973 AL390879.1-201ENST00000439143 386 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 AL663074.2-201ENST00000440621 479 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 ARL5AP2-201ENST00000444698 533 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.54□□□□□ -1.36
CNGA1P29973 PSAT1P4-201ENST00000466500 526 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 AC004453.1-201ENST00000487895 408 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.54□□□□□ -1.36
CNGA1P29973 AC008837.1-201ENST00000511513 412 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.54□□□□□ -1.36
CNGA1P29973 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.54□□□□□ -1.36
CNGA1P29973 LRRC6P1-201ENST00000532188 885 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CNGA1P29973 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.54□□□□□ -1.36
CNGA1P29973 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.54□□□□□ -1.36
CNGA1P29973 AC122134.1-201ENST00000565664 1104 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 AC095057.3-201ENST00000567102 1157 ntBASIC6.54□□□□□ -1.36
CNGA1P29973 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.54□□□□□ -1.36
CNGA1P29973 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms