Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.62□□□□□ -1.51
COL4A5P29400 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A5P29400 SNORA31.9-201ENST00000516429 84 ntBASIC5.62□□□□□ -1.51
COL4A5P29400 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.62□□□□□ -1.51
COL4A5P29400 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.62□□□□□ -1.51
COL4A5P29400 AP001160.4-201ENST00000596971 382 ntBASIC5.62□□□□□ -1.51
COL4A5P29400 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.62□□□□□ -1.51
COL4A5P29400 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.62□□□□□ -1.51
COL4A5P29400 AC026367.3-201ENST00000619032 590 ntBASIC5.62□□□□□ -1.51
COL4A5P29400 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A5P29400 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL4A5P29400 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A5P29400 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
COL4A5P29400 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A5P29400 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A5P29400 AC008033.1-201ENST00000216407 1162 ntBASIC5.61□□□□□ -1.51
COL4A5P29400 AL590762.2-201ENST00000395798 571 ntBASIC5.61□□□□□ -1.51
COL4A5P29400 AL445189.1-201ENST00000405722 338 ntBASIC5.61□□□□□ -1.51
COL4A5P29400 NRBF2P2-201ENST00000413087 861 ntBASIC5.61□□□□□ -1.51
COL4A5P29400 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A5P29400 AL132765.1-201ENST00000434165 553 ntBASIC5.61□□□□□ -1.51
COL4A5P29400 AC105137.1-201ENST00000484355 562 ntBASIC5.61□□□□□ -1.51
COL4A5P29400 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.61□□□□□ -1.51
COL4A5P29400 AC016559.2-201ENST00000510759 359 ntBASIC5.61□□□□□ -1.51
COL4A5P29400 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A5P29400 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.61□□□□□ -1.51
COL4A5P29400 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A5P29400 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A5P29400 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.61□□□□□ -1.51
COL4A5P29400 OR7A19P-201ENST00000608051 733 ntBASIC5.61□□□□□ -1.51
COL4A5P29400 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.61□□□□□ -1.51
COL4A5P29400 AP003497.2-201ENST00000624220 967 ntBASIC5.61□□□□□ -1.51
COL4A5P29400 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A5P29400 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A5P29400 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
COL4A5P29400 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL4A5P29400 AC135352.1-201ENST00000506173 1418 ntBASIC5.61□□□□□ -1.51
COL4A5P29400 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A5P29400 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.6□□□□□ -1.51
COL4A5P29400 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A5P29400 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A5P29400 RNA5SP366-201ENST00000365454 123 ntBASIC5.6□□□□□ -1.51
COL4A5P29400 SNORA70.4-201ENST00000365509 134 ntBASIC5.6□□□□□ -1.51
COL4A5P29400 RNU4-64P-201ENST00000410795 131 ntBASIC5.6□□□□□ -1.51
COL4A5P29400 CEACAMP8-201ENST00000413902 580 ntBASIC5.6□□□□□ -1.51
COL4A5P29400 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.6□□□□□ -1.51
COL4A5P29400 VN1R37P-201ENST00000419096 748 ntBASIC5.6□□□□□ -1.51
COL4A5P29400 AL451062.2-201ENST00000427515 271 ntBASIC5.6□□□□□ -1.51
COL4A5P29400 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.6□□□□□ -1.51
COL4A5P29400 H2AFZP5-201ENST00000446960 382 ntBASIC5.6□□□□□ -1.51
COL4A5P29400 UQCRHP4-201ENST00000471686 272 ntBASIC5.6□□□□□ -1.51
COL4A5P29400 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.6□□□□□ -1.51
COL4A5P29400 RN7SL810P-201ENST00000493031 276 ntBASIC5.6□□□□□ -1.51
COL4A5P29400 AC025164.1-201ENST00000496249 478 ntBASIC5.6□□□□□ -1.51
COL4A5P29400 AC108475.1-201ENST00000507880 950 ntBASIC5.6□□□□□ -1.51
COL4A5P29400 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.6□□□□□ -1.51
COL4A5P29400 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
COL4A5P29400 AC040958.1-201ENST00000561102 201 ntBASIC5.6□□□□□ -1.51
COL4A5P29400 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.6□□□□□ -1.51
COL4A5P29400 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.6□□□□□ -1.51
COL4A5P29400 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
COL4A5P29400 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A5P29400 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A5P29400 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A5P29400 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
COL4A5P29400 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.6□□□□□ -1.51
COL4A5P29400 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
COL4A5P29400 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.6□□□□□ -1.51
COL4A5P29400 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.6□□□□□ -1.51
COL4A5P29400 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A5P29400 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A5P29400 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A5P29400 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.6□□□□□ -1.51
COL4A5P29400 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.6□□□□□ -1.51
COL4A5P29400 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A5P29400 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A5P29400 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A5P29400 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A5P29400 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL4A5P29400 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
COL4A5P29400 PPIAP31-201ENST00000405422 495 ntBASIC5.59□□□□□ -1.51
COL4A5P29400 SNORA11F-201ENST00000408237 128 ntBASIC5.59□□□□□ -1.51
COL4A5P29400 OR8G2P-201ENST00000412796 908 ntBASIC5.59□□□□□ -1.51
COL4A5P29400 LINC01881-201ENST00000416103 412 ntBASIC5.59□□□□□ -1.51
COL4A5P29400 AP003730.1-201ENST00000524605 285 ntBASIC5.59□□□□□ -1.51
COL4A5P29400 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.59□□□□□ -1.51
COL4A5P29400 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.59□□□□□ -1.51
COL4A5P29400 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.59□□□□□ -1.51
COL4A5P29400 AC053481.3-201ENST00000577881 843 ntBASIC5.59□□□□□ -1.51
COL4A5P29400 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.59□□□□□ -1.51
COL4A5P29400 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
COL4A5P29400 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL4A5P29400 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
COL4A5P29400 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.59□□□□□ -1.51
COL4A5P29400 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC5.59□□□□□ -1.51
COL4A5P29400 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL4A5P29400 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.59□□□□□ -1.51
COL4A5P29400 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
COL4A5P29400 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL4A5P29400 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms