Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.63□□□□□ -1.67
SHC1P29353 AC015802.5-201ENST00000607478 399 ntBASIC4.63□□□□□ -1.67
SHC1P29353 AC096586.2-201ENST00000610260 441 ntBASIC4.63□□□□□ -1.67
SHC1P29353 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.63□□□□□ -1.67
SHC1P29353 LINC01739-205ENST00000641890 573 ntBASIC4.63□□□□□ -1.67
SHC1P29353 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.63□□□□□ -1.67
SHC1P29353 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHC1P29353 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SHC1P29353 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.63□□□□□ -1.67
SHC1P29353 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SHC1P29353 AP001642.1-201ENST00000624727 2117 ntBASIC4.63□□□□□ -1.67
SHC1P29353 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHC1P29353 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHC1P29353 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHC1P29353 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SHC1P29353 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHC1P29353 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHC1P29353 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SHC1P29353 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.62□□□□□ -1.67
SHC1P29353 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHC1P29353 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHC1P29353 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHC1P29353 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.62□□□□□ -1.67
SHC1P29353 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHC1P29353 SNURFL-201ENST00000309296 343 ntBASIC4.62□□□□□ -1.67
SHC1P29353 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SHC1P29353 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SHC1P29353 RN7SKP114-201ENST00000410327 279 ntBASIC4.62□□□□□ -1.67
SHC1P29353 RNU4-34P-201ENST00000410431 124 ntBASIC4.62□□□□□ -1.67
SHC1P29353 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHC1P29353 MTND2P15-201ENST00000418575 892 ntBASIC4.62□□□□□ -1.67
SHC1P29353 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.62□□□□□ -1.67
SHC1P29353 TRGV7-201ENST00000427089 353 ntBASIC4.62□□□□□ -1.67
SHC1P29353 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.62□□□□□ -1.67
SHC1P29353 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.62□□□□□ -1.67
SHC1P29353 RHOT1P3-201ENST00000436571 331 ntBASIC4.62□□□□□ -1.67
SHC1P29353 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.62□□□□□ -1.67
SHC1P29353 GAPDHP58-201ENST00000438477 1006 ntBASIC4.62□□□□□ -1.67
SHC1P29353 VN1R48P-201ENST00000448149 1036 ntBASIC4.62□□□□□ -1.67
SHC1P29353 RNA5SP103-201ENST00000459503 118 ntBASIC4.62□□□□□ -1.67
SHC1P29353 AC092905.1-201ENST00000467527 949 ntBASIC4.62□□□□□ -1.67
SHC1P29353 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.62□□□□□ -1.67
SHC1P29353 CAB39P1-201ENST00000502277 460 ntBASIC4.62□□□□□ -1.67
SHC1P29353 AC008638.1-201ENST00000506035 866 ntBASIC4.62□□□□□ -1.67
SHC1P29353 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SHC1P29353 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.62□□□□□ -1.67
SHC1P29353 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.62□□□□□ -1.67
SHC1P29353 HNRNPRP2-201ENST00000528421 743 ntBASIC4.62□□□□□ -1.67
SHC1P29353 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SHC1P29353 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.62□□□□□ -1.67
SHC1P29353 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SHC1P29353 AC016180.1-201ENST00000567945 403 ntBASIC4.62□□□□□ -1.67
SHC1P29353 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.62□□□□□ -1.67
SHC1P29353 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.62□□□□□ -1.67
SHC1P29353 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.62□□□□□ -1.67
SHC1P29353 AL356752.1-201ENST00000615844 593 ntBASIC4.62□□□□□ -1.67
SHC1P29353 AC018445.2-201ENST00000622987 260 ntBASIC4.62□□□□□ -1.67
SHC1P29353 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.62□□□□□ -1.67
SHC1P29353 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SHC1P29353 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SHC1P29353 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
SHC1P29353 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SHC1P29353 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
SHC1P29353 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHC1P29353 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHC1P29353 ZNF733P-202ENST00000444809 1573 ntBASIC4.61□□□□□ -1.67
SHC1P29353 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SHC1P29353 AC011447.7-201ENST00000624228 1590 ntBASIC4.61□□□□□ -1.67
SHC1P29353 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.61□□□□□ -1.67
SHC1P29353 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHC1P29353 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.61□□□□□ -1.67
SHC1P29353 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHC1P29353 AC112255.1-201ENST00000624070 2493 ntBASIC4.61□□□□□ -1.67
SHC1P29353 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHC1P29353 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHC1P29353 MIR765-201ENST00000390226 114 ntBASIC4.61□□□□□ -1.67
SHC1P29353 AL078599.1-201ENST00000402075 293 ntBASIC4.61□□□□□ -1.67
SHC1P29353 AL589994.1-201ENST00000404962 340 ntBASIC4.61□□□□□ -1.67
SHC1P29353 AL390316.1-201ENST00000406279 553 ntBASIC4.61□□□□□ -1.67
SHC1P29353 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.61□□□□□ -1.67
SHC1P29353 SPTLC1P2-201ENST00000407089 121 ntBASIC4.61□□□□□ -1.67
SHC1P29353 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.61□□□□□ -1.67
SHC1P29353 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.61□□□□□ -1.67
SHC1P29353 AL034379.1-201ENST00000423216 253 ntBASIC4.61□□□□□ -1.67
SHC1P29353 HSFY7P-201ENST00000432672 318 ntBASIC4.61□□□□□ -1.67
SHC1P29353 ZFAND6P1-201ENST00000434138 605 ntBASIC4.61□□□□□ -1.67
SHC1P29353 HSFY8P-201ENST00000437934 318 ntBASIC4.61□□□□□ -1.67
SHC1P29353 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.61□□□□□ -1.67
SHC1P29353 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.61□□□□□ -1.67
SHC1P29353 RPL34P20-201ENST00000442771 351 ntBASIC4.61□□□□□ -1.67
SHC1P29353 HSFY5P-201ENST00000453726 309 ntBASIC4.61□□□□□ -1.67
SHC1P29353 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.61□□□□□ -1.67
SHC1P29353 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.61□□□□□ -1.67
SHC1P29353 OR5M14P-201ENST00000506803 618 ntBASIC4.61□□□□□ -1.67
SHC1P29353 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.61□□□□□ -1.67
SHC1P29353 HMGB3P16-201ENST00000508037 287 ntBASIC4.61□□□□□ -1.67
SHC1P29353 RFPL4AP3-201ENST00000515267 345 ntBASIC4.61□□□□□ -1.67
SHC1P29353 AC105031.1-201ENST00000518550 476 ntBASIC4.61□□□□□ -1.67
SHC1P29353 AC022832.1-201ENST00000530718 645 ntBASIC4.61□□□□□ -1.67
SHC1P29353 BNIP3P1-201ENST00000547295 580 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms