Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RFX1P22670 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX1P22670 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RFX1P22670 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX1P22670 AC018628.1-201ENST00000624147 3819 ntBASIC7.47□□□□□ -1.21
RFX1P22670 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX1P22670 CLCA3P-203ENST00000490028 2781 ntBASIC7.47□□□□□ -1.21
RFX1P22670 ELF2P3-201ENST00000445099 1506 ntBASIC7.47□□□□□ -1.21
RFX1P22670 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.47□□□□□ -1.21
RFX1P22670 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
RFX1P22670 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
RFX1P22670 AC011592.1-201ENST00000624647 3634 ntBASIC7.46□□□□□ -1.21
RFX1P22670 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
RFX1P22670 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RFX1P22670 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.46□□□□□ -1.21
RFX1P22670 CDY19P-201ENST00000411668 1613 ntBASIC7.46□□□□□ -1.21
RFX1P22670 CDY18P-201ENST00000438294 1609 ntBASIC7.46□□□□□ -1.21
RFX1P22670 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.46□□□□□ -1.21
RFX1P22670 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.46□□□□□ -1.22
RFX1P22670 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RFX1P22670 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RFX1P22670 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
RFX1P22670 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RFX1P22670 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.46□□□□□ -1.22
RFX1P22670 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RFX1P22670 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RFX1P22670 RNU6-694P-201ENST00000364071 147 ntBASIC7.46□□□□□ -1.22
RFX1P22670 RN7SKP226-201ENST00000364912 300 ntBASIC7.46□□□□□ -1.22
RFX1P22670 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RFX1P22670 MIR99A-201ENST00000384906 81 ntBASIC7.46□□□□□ -1.22
RFX1P22670 RPS24P12-201ENST00000402084 394 ntBASIC7.46□□□□□ -1.22
RFX1P22670 RNU6-248P-201ENST00000410720 107 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC7.46□□□□□ -1.22
RFX1P22670 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.46□□□□□ -1.22
RFX1P22670 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC7.46□□□□□ -1.22
RFX1P22670 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.46□□□□□ -1.22
RFX1P22670 AC083875.1-201ENST00000419509 405 ntBASIC7.46□□□□□ -1.22
RFX1P22670 DYNLL1P7-201ENST00000429273 258 ntBASIC7.46□□□□□ -1.22
RFX1P22670 FTLP17-201ENST00000432567 525 ntBASIC7.46□□□□□ -1.22
RFX1P22670 ELOCP10-201ENST00000440624 327 ntBASIC7.46□□□□□ -1.22
RFX1P22670 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.46□□□□□ -1.22
RFX1P22670 CRYGGP-201ENST00000443337 145 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AC005297.1-201ENST00000444765 862 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AL035551.1-201ENST00000446931 348 ntBASIC7.46□□□□□ -1.22
RFX1P22670 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC7.46□□□□□ -1.22
RFX1P22670 AL033528.1-201ENST00000453780 140 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.46□□□□□ -1.22
RFX1P22670 MTND6P6-201ENST00000478031 263 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AC090638.1-201ENST00000498296 909 ntBASIC7.46□□□□□ -1.22
RFX1P22670 PDLIM1P4-201ENST00000504327 1006 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AC025674.1-201ENST00000507074 324 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AC096754.1-201ENST00000508904 818 ntBASIC7.46□□□□□ -1.22
RFX1P22670 KRT19P6-201ENST00000510983 209 ntBASIC7.46□□□□□ -1.22
RFX1P22670 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC7.46□□□□□ -1.22
RFX1P22670 AC022483.1-201ENST00000514020 567 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.46□□□□□ -1.22
RFX1P22670 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC7.46□□□□□ -1.22
RFX1P22670 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.46□□□□□ -1.22
RFX1P22670 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RFX1P22670 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.46□□□□□ -1.22
RFX1P22670 AC244034.2-201ENST00000562504 509 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.46□□□□□ -1.22
RFX1P22670 AC091488.1-201ENST00000604239 660 ntBASIC7.46□□□□□ -1.22
RFX1P22670 ELOCP34-201ENST00000604436 327 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AP002360.3-201ENST00000607673 710 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AC091834.1-201ENST00000614543 472 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AC007014.2-201ENST00000615581 479 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.46□□□□□ -1.22
RFX1P22670 AP005212.3-201ENST00000619964 528 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AL139089.1-201ENST00000620372 975 ntBASIC7.46□□□□□ -1.22
RFX1P22670 MIR6503-201ENST00000622884 86 ntBASIC7.46□□□□□ -1.22
RFX1P22670 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.46□□□□□ -1.22
RFX1P22670 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RFX1P22670 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RFX1P22670 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.46□□□□□ -1.22
RFX1P22670 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RFX1P22670 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RFX1P22670 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.46□□□□□ -1.22
RFX1P22670 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RFX1P22670 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RFX1P22670 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RFX1P22670 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RFX1P22670 PPBPP2-201ENST00000513150 1362 ntBASIC7.46□□□□□ -1.22
RFX1P22670 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RFX1P22670 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.46□□□□□ -1.22
RFX1P22670 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
RFX1P22670 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
RFX1P22670 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.45□□□□□ -1.22
RFX1P22670 LPAL2-203ENST00000454031 2498 ntBASIC7.45□□□□□ -1.22
RFX1P22670 MAPK10-383ENST00000642032 3390 ntBASIC7.45□□□□□ -1.22
RFX1P22670 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.45□□□□□ -1.22
RFX1P22670 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RFX1P22670 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.45□□□□□ -1.22
RFX1P22670 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RFX1P22670 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.45□□□□□ -1.22
RFX1P22670 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RFX1P22670 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RFX1P22670 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RFX1P22670 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms