Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.38□□□□□ -1.55
PDGFRAP16234 BRWD1P3-201ENST00000428816 390 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.38□□□□□ -1.55
PDGFRAP16234 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.38□□□□□ -1.55
PDGFRAP16234 RPSAP50-201ENST00000481955 852 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.38□□□□□ -1.55
PDGFRAP16234 RN7SL808P-201ENST00000496066 299 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.38□□□□□ -1.55
PDGFRAP16234 SNRPCP2-201ENST00000504370 475 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFRAP16234 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.38□□□□□ -1.55
PDGFRAP16234 RNU6-760P-201ENST00000516078 97 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.38□□□□□ -1.55
PDGFRAP16234 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFRAP16234 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFRAP16234 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFRAP16234 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFRAP16234 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.38□□□□□ -1.55
PDGFRAP16234 BMS1P7-201ENST00000602440 1052 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 AL445222.1-201ENST00000607259 628 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 AL135786.2-201ENST00000608422 615 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFRAP16234 AC239803.2-201ENST00000610161 430 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 AL118556.2-201ENST00000614375 824 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFRAP16234 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.38□□□□□ -1.55
PDGFRAP16234 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
PDGFRAP16234 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFRAP16234 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PDGFRAP16234 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PDGFRAP16234 AC083843.2-201ENST00000568248 6253 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 AC063976.2-201ENST00000425667 3556 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 BTBD10P1-201ENST00000549824 1352 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 CASC19-221ENST00000641309 1382 ntBASIC5.38□□□□□ -1.55
PDGFRAP16234 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFRAP16234 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFRAP16234 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFRAP16234 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFRAP16234 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDGFRAP16234 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFRAP16234 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFRAP16234 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFRAP16234 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.37□□□□□ -1.55
PDGFRAP16234 AL031595.2-201ENST00000624215 19071 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFRAP16234 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
PDGFRAP16234 AC092376.2-201ENST00000622621 4116 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PDGFRAP16234 ADAM5-202ENST00000399789 1942 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PDGFRAP16234 RNU4-7P-201ENST00000364758 141 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 MIR765-201ENST00000390226 114 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 AC104297.1-201ENST00000393779 870 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 HMGB3P7-201ENST00000400214 611 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 U3.36-201ENST00000408418 213 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 RN7SKP213-201ENST00000410746 298 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 RNF19BPX-201ENST00000426224 625 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.37□□□□□ -1.55
PDGFRAP16234 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.37□□□□□ -1.55
PDGFRAP16234 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.37□□□□□ -1.55
PDGFRAP16234 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.37□□□□□ -1.55
PDGFRAP16234 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.37□□□□□ -1.55
PDGFRAP16234 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFRAP16234 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.37□□□□□ -1.55
PDGFRAP16234 RN7SL443P-201ENST00000464331 290 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 BX284632.1-201ENST00000478218 541 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 AC147055.3-201ENST00000510547 851 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 AC138832.1-201ENST00000522871 556 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 AC012414.2-201ENST00000559474 187 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 AC114947.2-201ENST00000565748 2125 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 AC009852.2-201ENST00000567898 485 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFRAP16234 SNX6P1-201ENST00000601728 1224 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 TAS2R6P-201ENST00000605022 826 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.37□□□□□ -1.55
PDGFRAP16234 AP005432.2-201ENST00000608162 586 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 AC019131.2-201ENST00000609071 870 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.37□□□□□ -1.55
PDGFRAP16234 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.37□□□□□ -1.55
PDGFRAP16234 AC099494.2-201ENST00000623371 978 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 AP003499.2-201ENST00000624100 483 ntBASIC5.37□□□□□ -1.55
PDGFRAP16234 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.37□□□□□ -1.55
PDGFRAP16234 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFRAP16234 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PDGFRAP16234 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
PDGFRAP16234 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFRAP16234 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFRAP16234 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.37□□□□□ -1.55
PDGFRAP16234 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.37□□□□□ -1.55
PDGFRAP16234 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.37□□□□□ -1.55
PDGFRAP16234 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PDGFRAP16234 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFRAP16234 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFRAP16234 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFRAP16234 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PDGFRAP16234 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.36□□□□□ -1.55
PDGFRAP16234 SNORA74A-201ENST00000364089 198 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 MIR421-201ENST00000365696 85 ntBASIC5.36□□□□□ -1.55
PDGFRAP16234 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFRAP16234 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms