Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CXCL1P09341 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL1P09341 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL1P09341 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.72□□□□□ -1.81
CXCL1P09341 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL1P09341 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC3.72□□□□□ -1.81
CXCL1P09341 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CXCL1P09341 OR4K12P-201ENST00000406538 961 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 OR6E1P-201ENST00000414424 923 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 AC093655.2-201ENST00000425735 631 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 CDY8P-201ENST00000428380 1279 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 AC073109.1-201ENST00000445066 978 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 CDY20P-201ENST00000447528 1279 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 NPM1P39-201ENST00000449818 867 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC3.72□□□□□ -1.81
CXCL1P09341 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.72□□□□□ -1.81
CXCL1P09341 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC3.72□□□□□ -1.81
CXCL1P09341 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC3.72□□□□□ -1.81
CXCL1P09341 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.72□□□□□ -1.81
CXCL1P09341 GTF2F2P1-201ENST00000511083 675 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC3.72□□□□□ -1.81
CXCL1P09341 RFPL4AP3-201ENST00000515267 345 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 AC008694.2-201ENST00000517591 306 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.72□□□□□ -1.81
CXCL1P09341 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC3.72□□□□□ -1.81
CXCL1P09341 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.72□□□□□ -1.81
CXCL1P09341 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC3.72□□□□□ -1.81
CXCL1P09341 CCDC58P1-201ENST00000578567 430 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 RBM22P1-201ENST00000578589 1214 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC3.72□□□□□ -1.81
CXCL1P09341 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC3.72□□□□□ -1.81
CXCL1P09341 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.72□□□□□ -1.81
CXCL1P09341 AP002884.5-201ENST00000595053 1132 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.72□□□□□ -1.81
CXCL1P09341 AC124856.1-201ENST00000600819 896 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 AL137072.1-201ENST00000603444 466 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 AC104687.2-201ENST00000604442 342 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 AC108865.2-201ENST00000606881 432 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 AL353726.1-201ENST00000614041 1000 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.72□□□□□ -1.81
CXCL1P09341 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL1P09341 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.72□□□□□ -1.81
CXCL1P09341 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL1P09341 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CXCL1P09341 CDY3P-201ENST00000454543 1618 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL1P09341 CASC19-255ENST00000641733 1385 ntBASIC3.72□□□□□ -1.81
CXCL1P09341 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CXCL1P09341 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.72□□□□□ -1.81
CXCL1P09341 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC3.72□□□□□ -1.81
CXCL1P09341 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL1P09341 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CXCL1P09341 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.71□□□□□ -1.81
CXCL1P09341 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
CXCL1P09341 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC3.71□□□□□ -1.81
CXCL1P09341 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CXCL1P09341 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CXCL1P09341 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.71□□□□□ -1.82
CXCL1P09341 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.71□□□□□ -1.82
CXCL1P09341 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CXCL1P09341 RN7SKP224-201ENST00000364140 325 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 BPHL-201ENST00000380368 797 ntTSL 5 BASIC3.71□□□□□ -1.82
CXCL1P09341 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CXCL1P09341 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CXCL1P09341 RNA5SP339-201ENST00000390987 122 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CXCL1P09341 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CXCL1P09341 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CXCL1P09341 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 MIR1182-201ENST00000408363 97 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.71□□□□□ -1.82
CXCL1P09341 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC3.71□□□□□ -1.82
CXCL1P09341 CLNS1AP1-201ENST00000435954 682 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 HLA-N-201ENST00000437516 135 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 RPS29P9-201ENST00000440360 171 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC3.71□□□□□ -1.82
CXCL1P09341 HLA-DPA3-207ENST00000454398 229 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 Z92846.1-201ENST00000456203 268 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 RPS26P39-201ENST00000469206 341 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.71□□□□□ -1.82
CXCL1P09341 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC3.71□□□□□ -1.82
CXCL1P09341 AL136038.1-201ENST00000497246 351 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 AC139783.2-201ENST00000504847 1145 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 AC011411.1-201ENST00000509592 876 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC3.71□□□□□ -1.82
CXCL1P09341 HNRNPKP5-201ENST00000515300 253 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 AC011853.1-201ENST00000518911 454 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CXCL1P09341 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CXCL1P09341 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.71□□□□□ -1.82
CXCL1P09341 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.71□□□□□ -1.82
CXCL1P09341 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC3.71□□□□□ -1.82
CXCL1P09341 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC3.71□□□□□ -1.82
CXCL1P09341 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC3.71□□□□□ -1.82
CXCL1P09341 RPL10P14-201ENST00000565265 298 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.71□□□□□ -1.82
CXCL1P09341 MIR1273E-201ENST00000581165 102 ntBASIC3.71□□□□□ -1.82
CXCL1P09341 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC3.71□□□□□ -1.82
CXCL1P09341 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms