Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.77□□□□□ -1.49
COL1A1P02452 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.77□□□□□ -1.49
COL1A1P02452 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL1A1P02452 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
COL1A1P02452 RNU4-39P-201ENST00000362455 127 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL1A1P02452 MIR659-201ENST00000384963 97 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 RPL7P57-201ENST00000423238 740 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.77□□□□□ -1.49
COL1A1P02452 AC012519.1-201ENST00000424588 610 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.77□□□□□ -1.49
COL1A1P02452 RPL12P28-201ENST00000430852 489 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.77□□□□□ -1.49
COL1A1P02452 AC073143.1-201ENST00000436316 395 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.77□□□□□ -1.49
COL1A1P02452 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.77□□□□□ -1.49
COL1A1P02452 MRPL35P2-201ENST00000448009 511 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.77□□□□□ -1.49
COL1A1P02452 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.77□□□□□ -1.49
COL1A1P02452 AC073358.1-201ENST00000505671 684 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 AC138701.1-201ENST00000524329 714 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 OR8G5-201ENST00000524943 1041 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.77□□□□□ -1.49
COL1A1P02452 GTF2IP11-201ENST00000526931 420 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.77□□□□□ -1.49
COL1A1P02452 AC005962.2-201ENST00000611427 652 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 AC068724.3-201ENST00000625906 87 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC5.77□□□□□ -1.49
COL1A1P02452 MIR6830-201ENST00000636015 70 ntBASIC5.77□□□□□ -1.49
COL1A1P02452 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
COL1A1P02452 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL1A1P02452 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL1A1P02452 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.76□□□□□ -1.49
COL1A1P02452 AC022417.1-201ENST00000624768 1303 ntBASIC5.76□□□□□ -1.49
COL1A1P02452 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COL1A1P02452 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
COL1A1P02452 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL1A1P02452 MTCO1P15-201ENST00000529569 1526 ntBASIC5.76□□□□□ -1.49
COL1A1P02452 AC002525.1-201ENST00000624392 1622 ntBASIC5.76□□□□□ -1.49
COL1A1P02452 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL1A1P02452 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL1A1P02452 RNA5SP187-201ENST00000384400 119 ntBASIC5.76□□□□□ -1.49
COL1A1P02452 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.76□□□□□ -1.49
COL1A1P02452 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.76□□□□□ -1.49
COL1A1P02452 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL1A1P02452 AL049874.2-201ENST00000492636 288 ntBASIC5.76□□□□□ -1.49
COL1A1P02452 AL049830.4-201ENST00000555149 351 ntBASIC5.76□□□□□ -1.49
COL1A1P02452 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.76□□□□□ -1.49
COL1A1P02452 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.76□□□□□ -1.49
COL1A1P02452 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.76□□□□□ -1.49
COL1A1P02452 MIR1254-2-201ENST00000579553 63 ntBASIC5.76□□□□□ -1.49
COL1A1P02452 AC008782.1-201ENST00000603386 430 ntBASIC5.76□□□□□ -1.49
COL1A1P02452 MIR6716-201ENST00000613413 80 ntBASIC5.76□□□□□ -1.49
COL1A1P02452 FRG1EP-201ENST00000634469 770 ntBASIC5.76□□□□□ -1.49
COL1A1P02452 OR52H1-202ENST00000641796 1061 ntBASIC5.76□□□□□ -1.49
COL1A1P02452 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.76□□□□□ -1.49
COL1A1P02452 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL1A1P02452 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL1A1P02452 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.75□□□□□ -1.49
COL1A1P02452 AC093671.1-201ENST00000624981 2929 ntBASIC5.75□□□□□ -1.49
COL1A1P02452 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL1A1P02452 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL1A1P02452 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
COL1A1P02452 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL1A1P02452 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL1A1P02452 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL1A1P02452 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.75□□□□□ -1.49
COL1A1P02452 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
COL1A1P02452 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.75□□□□□ -1.49
COL1A1P02452 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL1A1P02452 VN1R37P-201ENST00000419096 748 ntBASIC5.75□□□□□ -1.49
COL1A1P02452 RNU1-6P-201ENST00000516290 144 ntBASIC5.75□□□□□ -1.49
COL1A1P02452 RPL23AP53-201ENST00000521854 457 ntBASIC5.75□□□□□ -1.49
COL1A1P02452 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.75□□□□□ -1.49
COL1A1P02452 BNIP3P5-201ENST00000562290 498 ntBASIC5.75□□□□□ -1.49
COL1A1P02452 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.75□□□□□ -1.49
COL1A1P02452 AC243960.7-201ENST00000623532 707 ntBASIC5.75□□□□□ -1.49
COL1A1P02452 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.75□□□□□ -1.49
COL1A1P02452 AC011755.1-201ENST00000623763 2049 ntBASIC5.75□□□□□ -1.49
COL1A1P02452 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL1A1P02452 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL1A1P02452 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL1A1P02452 AP000473.2-201ENST00000602659 1537 ntBASIC5.75□□□□□ -1.49
COL1A1P02452 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.74□□□□□ -1.49
COL1A1P02452 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
COL1A1P02452 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL1A1P02452 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL1A1P02452 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.74□□□□□ -1.49
COL1A1P02452 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
COL1A1P02452 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.74□□□□□ -1.49
COL1A1P02452 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.74□□□□□ -1.49
COL1A1P02452 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
COL1A1P02452 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC5.74□□□□□ -1.49
COL1A1P02452 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.74□□□□□ -1.49
COL1A1P02452 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
COL1A1P02452 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL1A1P02452 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL1A1P02452 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL1A1P02452 IGKV7-3-201ENST00000357453 298 ntBASIC5.74□□□□□ -1.49
COL1A1P02452 U3.22-201ENST00000391120 215 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms