Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMAD6O43541 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
SMAD6O43541 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SMAD6O43541 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMAD6O43541 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMAD6O43541 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMAD6O43541 AC016745.2-201ENST00000608834 3443 ntBASIC5.35□□□□□ -1.55
SMAD6O43541 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMAD6O43541 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMAD6O43541 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SMAD6O43541 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SMAD6O43541 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMAD6O43541 AC012321.1-201ENST00000561622 1588 ntBASIC5.34□□□□□ -1.55
SMAD6O43541 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMAD6O43541 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMAD6O43541 TRIM51GP-201ENST00000534741 1350 ntBASIC5.34□□□□□ -1.55
SMAD6O43541 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMAD6O43541 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.34□□□□□ -1.55
SMAD6O43541 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SMAD6O43541 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.34□□□□□ -1.55
SMAD6O43541 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMAD6O43541 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.34□□□□□ -1.55
SMAD6O43541 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.34□□□□□ -1.55
SMAD6O43541 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.34□□□□□ -1.55
SMAD6O43541 RN7SKP126-201ENST00000411143 300 ntBASIC5.34□□□□□ -1.55
SMAD6O43541 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.34□□□□□ -1.55
SMAD6O43541 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMAD6O43541 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.34□□□□□ -1.55
SMAD6O43541 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.34□□□□□ -1.55
SMAD6O43541 VTI1BP4-201ENST00000427516 527 ntBASIC5.34□□□□□ -1.55
SMAD6O43541 AL136231.1-201ENST00000429407 730 ntBASIC5.34□□□□□ -1.55
SMAD6O43541 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.34□□□□□ -1.55
SMAD6O43541 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.34□□□□□ -1.55
SMAD6O43541 ELOCP13-201ENST00000443934 329 ntBASIC5.34□□□□□ -1.55
SMAD6O43541 NOP56P2-201ENST00000447491 769 ntBASIC5.34□□□□□ -1.55
SMAD6O43541 AL591363.1-201ENST00000450091 483 ntBASIC5.34□□□□□ -1.55
SMAD6O43541 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.34□□□□□ -1.55
SMAD6O43541 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.34□□□□□ -1.55
SMAD6O43541 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.34□□□□□ -1.55
SMAD6O43541 AC024940.3-201ENST00000538551 316 ntBASIC5.34□□□□□ -1.55
SMAD6O43541 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.34□□□□□ -1.55
SMAD6O43541 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMAD6O43541 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.34□□□□□ -1.55
SMAD6O43541 AC044860.2-201ENST00000561005 179 ntBASIC5.34□□□□□ -1.55
SMAD6O43541 AC234775.3-201ENST00000564612 656 ntBASIC5.34□□□□□ -1.55
SMAD6O43541 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.34□□□□□ -1.55
SMAD6O43541 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.34□□□□□ -1.55
SMAD6O43541 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMAD6O43541 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.34□□□□□ -1.55
SMAD6O43541 AC010632.3-201ENST00000611377 369 ntBASIC5.34□□□□□ -1.55
SMAD6O43541 TMEM30CP-203ENST00000637814 1035 ntBASIC5.34□□□□□ -1.55
SMAD6O43541 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.34□□□□□ -1.55
SMAD6O43541 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
SMAD6O43541 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMAD6O43541 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMAD6O43541 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SMAD6O43541 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.34□□□□□ -1.56
SMAD6O43541 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
SMAD6O43541 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.34□□□□□ -1.56
SMAD6O43541 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SMAD6O43541 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.34□□□□□ -1.56
SMAD6O43541 AC079298.1-201ENST00000625026 1619 ntBASIC5.34□□□□□ -1.56
SMAD6O43541 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SMAD6O43541 ZNF733P-202ENST00000444809 1573 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 AP000473.2-201ENST00000602659 1537 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SMAD6O43541 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.33□□□□□ -1.56
SMAD6O43541 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SMAD6O43541 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMAD6O43541 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMAD6O43541 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMAD6O43541 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.33□□□□□ -1.56
SMAD6O43541 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.33□□□□□ -1.56
SMAD6O43541 AL645568.2-201ENST00000432815 1337 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.33□□□□□ -1.56
SMAD6O43541 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMAD6O43541 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMAD6O43541 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMAD6O43541 SNORA17.1-201ENST00000362945 126 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 RN7SKP145-201ENST00000363291 303 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 SNORA70-201ENST00000384436 135 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 RNU6-1263P-201ENST00000384601 106 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 MIR7-1-201ENST00000384871 110 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 MIR765-201ENST00000390226 114 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 RNU6-1000P-201ENST00000391066 106 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 U3.36-201ENST00000408418 213 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 MTCO2P8-201ENST00000412213 658 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 RPL23AP27-201ENST00000415161 451 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.33□□□□□ -1.56
SMAD6O43541 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.33□□□□□ -1.56
SMAD6O43541 AC017019.1-201ENST00000426129 261 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 AC009784.1-201ENST00000426484 460 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.33□□□□□ -1.56
SMAD6O43541 BRWD1P3-201ENST00000428816 390 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMAD6O43541 MTND2P22-201ENST00000444325 1033 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 Z77249.1-201ENST00000444622 1175 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 AC069277.2-201ENST00000454211 432 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 AC108161.1-201ENST00000461060 402 ntBASIC5.33□□□□□ -1.56
SMAD6O43541 SEPT7P6-201ENST00000469999 1143 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms