Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SDCBPO00560 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SDCBPO00560 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SDCBPO00560 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SDCBPO00560 CASC19-281ENST00000642118 1554 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SDCBPO00560 SAMMSON-213ENST00000641336 1521 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SDCBPO00560 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.06□□□□□ -1.76
SDCBPO00560 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.06□□□□□ -1.76
SDCBPO00560 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SDCBPO00560 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.06□□□□□ -1.76
SDCBPO00560 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.06□□□□□ -1.76
SDCBPO00560 OR13Z1P-201ENST00000416141 834 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 AF186996.5-201ENST00000418098 904 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 AC005033.1-201ENST00000428904 813 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.06□□□□□ -1.76
SDCBPO00560 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.06□□□□□ -1.76
SDCBPO00560 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.06□□□□□ -1.76
SDCBPO00560 AC090114.3-201ENST00000479267 829 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 AC116562.1-201ENST00000485355 781 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.06□□□□□ -1.76
SDCBPO00560 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.06□□□□□ -1.76
SDCBPO00560 RNU6-709P-201ENST00000517257 104 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 HAUS8P1-201ENST00000549005 542 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SDCBPO00560 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.06□□□□□ -1.76
SDCBPO00560 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SDCBPO00560 MIR3691-201ENST00000578066 90 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 SNORA74C-1-201ENST00000580726 201 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.06□□□□□ -1.76
SDCBPO00560 COX6CP4-201ENST00000605798 228 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 EIF3FP1-201ENST00000613970 806 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 uc_338.18-201ENST00000615451 175 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 AL122125.1-201ENST00000616999 600 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 AC005086.4-201ENST00000623065 213 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.06□□□□□ -1.76
SDCBPO00560 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SDCBPO00560 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SDCBPO00560 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SDCBPO00560 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.06□□□□□ -1.76
SDCBPO00560 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SDCBPO00560 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SDCBPO00560 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SDCBPO00560 SOCS5P3-201ENST00000425115 1576 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 DHX9P1-201ENST00000436565 3076 ntBASIC4.06□□□□□ -1.76
SDCBPO00560 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SDCBPO00560 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SDCBPO00560 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SDCBPO00560 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SDCBPO00560 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SDCBPO00560 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.05□□□□□ -1.76
SDCBPO00560 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.05□□□□□ -1.76
SDCBPO00560 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SDCBPO00560 AC008758.3-201ENST00000507003 1829 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SDCBPO00560 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.05□□□□□ -1.76
SDCBPO00560 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SDCBPO00560 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.05□□□□□ -1.76
SDCBPO00560 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SDCBPO00560 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SDCBPO00560 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.05□□□□□ -1.76
SDCBPO00560 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SDCBPO00560 RNU6-249P-201ENST00000363016 102 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 SNORA51.1-201ENST00000363243 140 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 RNA5SP428-201ENST00000365129 132 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SDCBPO00560 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.05□□□□□ -1.76
SDCBPO00560 TBCAP2-201ENST00000416175 326 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.05□□□□□ -1.76
SDCBPO00560 AC092647.3-201ENST00000443044 633 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 AC000111.2-201ENST00000448200 210 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.05□□□□□ -1.76
SDCBPO00560 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.05□□□□□ -1.76
SDCBPO00560 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 SUMO2P4-201ENST00000504193 276 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.05□□□□□ -1.76
SDCBPO00560 TCP11X3P-202ENST00000514289 1254 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.05□□□□□ -1.76
SDCBPO00560 OR10G5P-201ENST00000532733 358 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.05□□□□□ -1.76
SDCBPO00560 AC090022.1-201ENST00000546569 311 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.05□□□□□ -1.76
SDCBPO00560 MIR4691-201ENST00000583764 85 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.05□□□□□ -1.76
SDCBPO00560 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.05□□□□□ -1.76
SDCBPO00560 AC006116.3-201ENST00000592968 361 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 AC093799.2-201ENST00000610062 578 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 AL627230.1-201ENST00000613077 211 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 AL591926.8-201ENST00000616876 211 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 MIR6729-201ENST00000618194 65 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.05□□□□□ -1.76
SDCBPO00560 AL353662.3-201ENST00000625131 237 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.05□□□□□ -1.76
SDCBPO00560 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.05□□□□□ -1.76
SDCBPO00560 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SDCBPO00560 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SDCBPO00560 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SDCBPO00560 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SDCBPO00560 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms