Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RN7SKP97-201ENST00000410966 333 ntBASIC4.88□□□□□ -1.63
SLC28A1O00337 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC28A1O00337 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC28A1O00337 RPL7L1P9-201ENST00000431298 745 ntBASIC4.88□□□□□ -1.63
SLC28A1O00337 RPS29P14-201ENST00000431518 171 ntBASIC4.88□□□□□ -1.63
SLC28A1O00337 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC28A1O00337 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.88□□□□□ -1.63
SLC28A1O00337 TXNP5-201ENST00000441043 315 ntBASIC4.88□□□□□ -1.63
SLC28A1O00337 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC28A1O00337 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AC034244.2-201ENST00000514668 858 ntBASIC4.88□□□□□ -1.63
SLC28A1O00337 AC026616.1-201ENST00000523157 525 ntBASIC4.88□□□□□ -1.63
SLC28A1O00337 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AC024940.3-201ENST00000538551 316 ntBASIC4.88□□□□□ -1.63
SLC28A1O00337 AP002373.2-201ENST00000541631 1060 ntBASIC4.88□□□□□ -1.63
SLC28A1O00337 AL390334.1-201ENST00000556395 450 ntBASIC4.88□□□□□ -1.63
SLC28A1O00337 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC28A1O00337 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC28A1O00337 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.88□□□□□ -1.63
SLC28A1O00337 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 AC074276.2-201ENST00000619891 348 ntBASIC4.88□□□□□ -1.63
SLC28A1O00337 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 MIR6837-201ENST00000620884 64 ntBASIC4.88□□□□□ -1.63
SLC28A1O00337 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC28A1O00337 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC28A1O00337 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC28A1O00337 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC28A1O00337 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC28A1O00337 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SLC28A1O00337 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC28A1O00337 SPATA2P1-201ENST00000431223 2055 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SLC28A1O00337 AL672167.1-204ENST00000641875 3017 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SLC28A1O00337 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC28A1O00337 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SLC28A1O00337 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SLC28A1O00337 SNORA17A-201ENST00000391185 133 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 MTND3P20-201ENST00000407663 186 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 AL590806.1-201ENST00000415818 853 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC28A1O00337 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.87□□□□□ -1.63
SLC28A1O00337 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC28A1O00337 AC108075.1-201ENST00000424692 529 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.87□□□□□ -1.63
SLC28A1O00337 OR2AH1P-201ENST00000425717 928 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC28A1O00337 AL590623.1-201ENST00000427864 105 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC28A1O00337 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC28A1O00337 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC28A1O00337 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC28A1O00337 AL627224.1-201ENST00000448334 444 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 AC023141.9-201ENST00000458734 412 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 RN7SL717P-201ENST00000478343 297 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 RPL7P39-201ENST00000481157 744 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 RN7SL591P-201ENST00000496150 292 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC28A1O00337 AC090568.1-201ENST00000509499 856 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 AC021146.7-201ENST00000509604 775 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 AC016550.3-201ENST00000515706 767 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 RNA5SP249-201ENST00000516127 99 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC28A1O00337 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC28A1O00337 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC28A1O00337 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC28A1O00337 AL049779.2-201ENST00000553847 315 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 AL390726.5-202ENST00000564800 256 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC28A1O00337 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC28A1O00337 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC28A1O00337 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.87□□□□□ -1.63
SLC28A1O00337 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC28A1O00337 KATNBL1P1-201ENST00000605192 748 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 AC015982.1-201ENST00000608113 465 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 AP001962.1-201ENST00000624114 559 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 SNORA17.5-201ENST00000630429 132 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 AC136428.4-201ENST00000634254 1155 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SLC28A1O00337 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SLC28A1O00337 AC093775.1-201ENST00000624154 1868 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC28A1O00337 AL731566.1-201ENST00000620490 1937 ntBASIC4.87□□□□□ -1.63
SLC28A1O00337 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC28A1O00337 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms