Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RN7SL435P-201ENST00000584418 282 ntBASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL031320.1-201ENST00000604177 357 ntBASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 MIR7641-1-201ENST00000627518 61 ntBASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 ZNF652P1-201ENST00000442420 1309 ntBASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL031595.2-201ENST00000624215 19071 ntBASIC4.9□□□□□ -1.62
TMX2-CTNND1H3BSU7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.9□□□□□ -1.62
TMX2-CTNND1H3BSU7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
TMX2-CTNND1H3BSU7 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 MIR141-201ENST00000384975 95 ntBASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 RPS16P5-201ENST00000406501 404 ntBASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC012519.1-201ENST00000424588 610 ntBASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC090018.1-201ENST00000434369 367 ntBASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 GTF3AP5-201ENST00000442645 697 ntBASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 RPS4XP12-201ENST00000461747 709 ntBASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 RN7SL591P-201ENST00000496150 292 ntBASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 BNIP3P1-201ENST00000547295 580 ntBASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 UBE2FP2-201ENST00000566646 462 ntBASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 ADAM3B-201ENST00000569937 840 ntBASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC091042.1-201ENST00000579213 173 ntBASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC006272.2-201ENST00000594725 163 ntBASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 SALL4P2-201ENST00000423288 2910 ntBASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.9□□□□□ -1.63
TMX2-CTNND1H3BSU7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 RNVU1-6-201ENST00000364688 164 ntBASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC007559.1-201ENST00000428736 355 ntBASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC009220.1-201ENST00000451614 275 ntBASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC093827.1-201ENST00000480094 861 ntBASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 BTG4P1-201ENST00000510421 183 ntBASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 BTF3P13-201ENST00000513224 490 ntBASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 RAB9BP1-201ENST00000519581 626 ntBASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 MEMO1P5-201ENST00000604810 406 ntBASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL627230.1-201ENST00000613077 211 ntBASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 MIR6780A-201ENST00000615089 68 ntBASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 AL591926.8-201ENST00000616876 211 ntBASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 AC015914.2-201ENST00000618167 288 ntBASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TMX2-CTNND1H3BSU7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms