Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 CYCSP22-201ENST00000517555 339 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 AC027544.3-201ENST00000535082 757 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 MIR4260-201ENST00000583107 67 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 AP001160.4-201ENST00000596971 382 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 AC011445.2-201ENST00000599274 173 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 PSMA6P4-201ENST00000603247 718 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 RNU4-5P-201ENST00000607255 135 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 AL133481.2-203ENST00000607558 139 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 AC243654.2-201ENST00000612843 443 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 ATE1-AS1-202ENST00000636460 506 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 AC104446.1-201ENST00000613728 1321 ntBASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL4A3BPQ9Y5P4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 RPL11P3-201ENST00000395256 523 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 HMGB1P20-201ENST00000402555 677 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 RNU2-50P-201ENST00000410494 143 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 RN7SKP286-201ENST00000410894 299 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 RPL6P29-201ENST00000414863 865 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 PPIAP13-201ENST00000434706 478 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 YWHAQP9-201ENST00000445891 512 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 RPS17P15-201ENST00000475609 349 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AC090058.1-201ENST00000498788 435 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 HMGB1P23-201ENST00000518743 568 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AC126615.2-201ENST00000553003 515 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 MTCO1P40-201ENST00000574371 625 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 RN7SL753P-201ENST00000581238 290 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 MIR4420-201ENST00000583944 77 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AP001357.1-201ENST00000586304 1053 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AC060780.2-201ENST00000589047 198 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AC006116.5-201ENST00000591936 559 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AL513327.3-201ENST00000602618 469 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AL365400.2-201ENST00000605604 902 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 RNA5SP440-201ENST00000612665 119 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 RN7SL787P-201ENST00000613000 284 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 RN7SL544P-201ENST00000617232 284 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AC123767.1-202ENST00000620407 817 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 RN7SL763P-201ENST00000620922 284 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AC239868.2-201ENST00000564237 4527 ntBASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.44□□□□□ -1.38
COL4A3BPQ9Y5P4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A3BPQ9Y5P4 MFSD8-239ENST00000641590 2479 ntBASIC6.43□□□□□ -1.38
COL4A3BPQ9Y5P4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A3BPQ9Y5P4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.43□□□□□ -1.38
COL4A3BPQ9Y5P4 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A3BPQ9Y5P4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
COL4A3BPQ9Y5P4 MTCO1P56-201ENST00000401674 224 ntBASIC6.43□□□□□ -1.38
COL4A3BPQ9Y5P4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.43□□□□□ -1.38
COL4A3BPQ9Y5P4 SDHDP6-201ENST00000414693 480 ntBASIC6.43□□□□□ -1.38
COL4A3BPQ9Y5P4 RPL34P3-201ENST00000421454 338 ntBASIC6.43□□□□□ -1.38
COL4A3BPQ9Y5P4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A3BPQ9Y5P4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL4A3BPQ9Y5P4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.43□□□□□ -1.38
COL4A3BPQ9Y5P4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms