Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 RNU6-890P-201ENST00000384121 107 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 H2AFZP3-201ENST00000394213 387 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 MIR1302-6-201ENST00000408466 90 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 RN7SKP119-201ENST00000410753 273 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 VDAC1P9-201ENST00000412766 841 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AL136133.1-201ENST00000413694 376 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC018804.1-201ENST00000430381 618 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 TRAPPC2P3-201ENST00000443200 321 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC005008.1-201ENST00000456151 612 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC004062.1-201ENST00000509926 645 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 RNU6-410P-201ENST00000517006 107 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC103843.2-201ENST00000530523 682 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC008126.1-201ENST00000549019 480 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC040162.2-201ENST00000573092 157 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AP001029.3-201ENST00000588063 596 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AL513327.3-201ENST00000602618 469 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC020904.2-202ENST00000614660 1401 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 AC106800.1-201ENST00000501221 1362 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.83□□□□□ -1.16
VPS9D1Q9Y2B5 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 SPATA2P1-201ENST00000431223 2055 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 XPOTP1-201ENST00000443317 2398 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 RN7SKP95-201ENST00000362860 303 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 RNU4-1-201ENST00000363925 141 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 Y_RNA.380-201ENST00000365663 111 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 Y_RNA.496-201ENST00000384444 101 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 RNA5SP23-201ENST00000391006 105 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AL034417.1-201ENST00000399343 800 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 VDAC1P10-201ENST00000416715 891 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 GAPDHP34-201ENST00000432112 823 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 CLUHP5-201ENST00000438421 774 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 RPSAP40-201ENST00000442343 891 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 RPL7P14-201ENST00000449851 741 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AC079168.1-201ENST00000458741 345 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 RPL7AP2-201ENST00000496515 740 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 TRBVA-201ENST00000498804 316 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AC008967.1-201ENST00000504843 163 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AC067942.3-201ENST00000512025 362 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AC022080.3-201ENST00000544433 482 ntBASIC7.82□□□□□ -1.16
VPS9D1Q9Y2B5 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms