Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CR383656.5-201ENST00000547616 1340 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AL353625.1-202ENST00000366273 571 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 RNA5SP146-201ENST00000410743 123 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 RNU2-22P-201ENST00000411266 212 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC073587.1-201ENST00000447093 876 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC092647.2-201ENST00000452998 253 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC005412.2-201ENST00000492004 341 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC093890.1-201ENST00000502554 540 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC112184.1-201ENST00000505179 312 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC006499.3-201ENST00000506077 748 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 RNA5SP92-201ENST00000516437 110 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AL512310.9-201ENST00000553311 948 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AP001542.1-201ENST00000591314 200 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC079298.2-201ENST00000623885 459 ntBASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRAPPC4Q9Y296 AC104118.1-201ENST00000607625 1589 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 NXF4-202ENST00000416098 1465 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 AC000123.3-201ENST00000624029 4975 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 RN7SKP104-201ENST00000362605 328 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 RNU1-94P-201ENST00000362627 173 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 AL354714.3-201ENST00000447284 493 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 AL645937.3-201ENST00000453647 936 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 RPS18P6-201ENST00000476880 458 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 RN7SL727P-201ENST00000482164 296 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 RN7SL244P-201ENST00000493405 297 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 AC022882.1-201ENST00000532142 501 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 NMNAT1P1-201ENST00000554095 876 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 AC009163.6-201ENST00000612367 342 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 AL512624.1-201ENST00000613638 469 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 AC015660.5-201ENST00000623238 564 ntBASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAPPC4Q9Y296 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 SAMMSON-213ENST00000641336 1521 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 BTBD10P1-201ENST00000549824 1352 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 AC063976.2-201ENST00000425667 3556 ntBASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAPPC4Q9Y296 RPL23P2-201ENST00000320371 421 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms