Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AC008033.2-201ENST00000542626 177 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AC023389.2-201ENST00000580031 955 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AC068790.7-201ENST00000602347 528 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 AL022401.1-201ENST00000619498 108 ntBASIC4.67□□□□□ -1.66
CCDC88CQ9P219 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC88CQ9P219 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 OR4K15-201ENST00000305051 1216 ntBASIC4.66□□□□□ -1.66
CCDC88CQ9P219 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 USP9YP9-201ENST00000429406 715 ntBASIC4.66□□□□□ -1.66
CCDC88CQ9P219 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 AC138832.1-201ENST00000522871 556 ntBASIC4.66□□□□□ -1.66
CCDC88CQ9P219 AC063949.1-201ENST00000552900 865 ntBASIC4.66□□□□□ -1.66
CCDC88CQ9P219 AC090181.2-201ENST00000602975 672 ntBASIC4.66□□□□□ -1.66
CCDC88CQ9P219 AC022106.2-201ENST00000620114 757 ntBASIC4.66□□□□□ -1.66
CCDC88CQ9P219 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 AC009643.2-201ENST00000603543 1448 ntBASIC4.66□□□□□ -1.66
CCDC88CQ9P219 NCLP2-201ENST00000416078 1462 ntBASIC4.66□□□□□ -1.66
CCDC88CQ9P219 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
CCDC88CQ9P219 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CCDC88CQ9P219 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.65□□□□□ -1.66
CCDC88CQ9P219 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.65□□□□□ -1.66
CCDC88CQ9P219 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC88CQ9P219 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.65□□□□□ -1.66
CCDC88CQ9P219 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.65□□□□□ -1.66
CCDC88CQ9P219 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.65□□□□□ -1.66
CCDC88CQ9P219 RN7SL354P-201ENST00000469282 294 ntBASIC4.65□□□□□ -1.66
CCDC88CQ9P219 AC013356.1-201ENST00000489027 564 ntBASIC4.65□□□□□ -1.66
CCDC88CQ9P219 RN7SL205P-201ENST00000490174 284 ntBASIC4.65□□□□□ -1.66
CCDC88CQ9P219 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.65□□□□□ -1.66
CCDC88CQ9P219 AL671862.1-201ENST00000515851 349 ntBASIC4.65□□□□□ -1.66
CCDC88CQ9P219 RNU6-513P-201ENST00000516104 104 ntBASIC4.65□□□□□ -1.66
CCDC88CQ9P219 AC105031.1-201ENST00000518550 476 ntBASIC4.65□□□□□ -1.66
CCDC88CQ9P219 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.66
CCDC88CQ9P219 AL390726.5-202ENST00000564800 256 ntBASIC4.65□□□□□ -1.66
CCDC88CQ9P219 AC011840.5-201ENST00000582125 771 ntBASIC4.65□□□□□ -1.66
CCDC88CQ9P219 RN7SL52P-201ENST00000584271 284 ntBASIC4.65□□□□□ -1.66
CCDC88CQ9P219 MIR6780A-201ENST00000615089 68 ntBASIC4.65□□□□□ -1.66
CCDC88CQ9P219 RN7SL722P-201ENST00000617780 284 ntBASIC4.65□□□□□ -1.66
CCDC88CQ9P219 RN7SL565P-201ENST00000618246 284 ntBASIC4.65□□□□□ -1.66
CCDC88CQ9P219 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC88CQ9P219 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC88CQ9P219 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC88CQ9P219 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC88CQ9P219 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC88CQ9P219 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC88CQ9P219 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC88CQ9P219 ARL4AP5-201ENST00000404372 599 ntBASIC4.65□□□□□ -1.67
CCDC88CQ9P219 MIR1271-201ENST00000408537 86 ntBASIC4.65□□□□□ -1.67
CCDC88CQ9P219 AC069213.2-201ENST00000420238 366 ntBASIC4.65□□□□□ -1.67
CCDC88CQ9P219 AL645608.4-201ENST00000423619 154 ntBASIC4.65□□□□□ -1.67
CCDC88CQ9P219 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC88CQ9P219 AC012512.1-201ENST00000446594 718 ntBASIC4.65□□□□□ -1.67
CCDC88CQ9P219 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC88CQ9P219 IGHV5-78-201ENST00000450948 295 ntBASIC4.65□□□□□ -1.67
CCDC88CQ9P219 AC093166.2-201ENST00000455969 1017 ntBASIC4.65□□□□□ -1.67
CCDC88CQ9P219 RN7SL319P-201ENST00000480656 221 ntBASIC4.65□□□□□ -1.67
CCDC88CQ9P219 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC88CQ9P219 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC88CQ9P219 RN7SKP276-201ENST00000516242 268 ntBASIC4.65□□□□□ -1.67
CCDC88CQ9P219 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC88CQ9P219 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC88CQ9P219 NDUFB4P11-201ENST00000560510 395 ntBASIC4.65□□□□□ -1.67
CCDC88CQ9P219 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC88CQ9P219 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC88CQ9P219 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC88CQ9P219 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 AC020633.1-201ENST00000468439 2247 ntBASIC4.64□□□□□ -1.67
CCDC88CQ9P219 AL034370.1-201ENST00000397254 1590 ntBASIC4.64□□□□□ -1.67
CCDC88CQ9P219 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC88CQ9P219 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms