Protein–RNA interactions for Protein: Q9NXX6

NSMCE4A, Non-structural maintenance of chromosomes element 4 homolog A, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4AQ9NXX6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
NSMCE4AQ9NXX6 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.37□□□□□ -1.55
NSMCE4AQ9NXX6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NSMCE4AQ9NXX6 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NSMCE4AQ9NXX6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NSMCE4AQ9NXX6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
NSMCE4AQ9NXX6 AC009229.4-201ENST00000623854 1947 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AC011755.1-201ENST00000623763 2049 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AC005294.1-201ENST00000355509 281 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 RNU6-252P-201ENST00000363232 107 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 RNU6-317P-201ENST00000384031 107 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 RNA5SP122-201ENST00000384457 108 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 PEX12P1-201ENST00000400284 1048 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 RNA5SP296-201ENST00000410523 111 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 TCEA1P3-201ENST00000443005 880 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AL589765.3-201ENST00000446084 462 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 GAPDHP25-201ENST00000447061 1001 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AC105399.1-202ENST00000447303 205 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 PPIAP21-201ENST00000464473 501 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 RPL15P21-201ENST00000495592 567 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AC006499.4-201ENST00000510947 694 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 SNORA26.10-201ENST00000516427 141 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AL136520.1-202ENST00000555494 763 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AC107958.1-201ENST00000556576 290 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AC005034.4-201ENST00000603612 899 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 MIR6780B-201ENST00000610307 79 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 CU639417.4-201ENST00000623928 207 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AL512283.1-201ENST00000606756 1384 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 AC023421.1-201ENST00000590535 1785 ntBASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NSMCE4AQ9NXX6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 VN1R12P-201ENST00000403778 876 ntBASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 SLC20A1P1-201ENST00000413906 956 ntBASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 AL596448.1-201ENST00000415024 392 ntBASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 SRSF1P1-201ENST00000424058 520 ntBASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 AC009965.2-201ENST00000425328 970 ntBASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 HMGN2P27-201ENST00000427352 270 ntBASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 NPM1P24-201ENST00000428039 894 ntBASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 RPS24P8-201ENST00000431490 402 ntBASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 GSTM5P1-201ENST00000434751 660 ntBASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 FMO7P-201ENST00000436045 768 ntBASIC5.35□□□□□ -1.55
NSMCE4AQ9NXX6 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms