Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 CNOT7P2-201ENST00000441051 832 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AL354710.1-201ENST00000453641 246 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 RN7SL222P-201ENST00000476452 299 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 OR2AO1P-201ENST00000476497 403 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AC005412.2-201ENST00000492004 341 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 CBX3P2-202ENST00000583365 535 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AC095055.1-201ENST00000603472 1113 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AC012557.1-201ENST00000607115 611 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AC126915.2-201ENST00000610957 190 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AC008115.4-201ENST00000619780 775 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AP002505.2-201ENST00000623585 696 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AC093849.1-201ENST00000563631 2209 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 AC024341.1-201ENST00000526444 1552 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AC004817.4-201ENST00000602396 3625 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 MIR600-201ENST00000385007 98 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 TRGV6-201ENST00000417928 299 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 MARK2P12-201ENST00000420129 585 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 FAR2P1-206ENST00000449736 709 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AC243772.1-201ENST00000451620 410 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AL606490.1-201ENST00000452266 765 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 SYT14P1-201ENST00000481459 721 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 RNU6-1004P-201ENST00000516584 111 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 RNA5SP230-201ENST00000517039 122 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AC103833.1-201ENST00000517442 172 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AC008083.2-201ENST00000546707 476 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 MIR1269B-201ENST00000580405 75 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AL137072.1-201ENST00000603444 466 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AL645927.2-201ENST00000618350 349 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AP002967.1-201ENST00000624203 539 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AP003497.2-201ENST00000624220 967 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 BX005019.1-201ENST00000561881 1810 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 AL450345.1-202ENST00000605741 3881 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
BLOC1S4Q9NUP1 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 MAPK10-328ENST00000641553 4009 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 SNORA17.1-201ENST00000362945 126 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 ATP5HP3-201ENST00000396994 486 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 AL390316.1-201ENST00000406279 553 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms