Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSU72Q9NP77 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSU72Q9NP77 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSU72Q9NP77 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC092724.1-201ENST00000624623 3397 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSU72Q9NP77 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSU72Q9NP77 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSU72Q9NP77 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 RNA5SP478-201ENST00000364657 115 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 RNU4-31P-201ENST00000384211 141 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 RNU6-1263P-201ENST00000384601 106 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 MIR128-2-201ENST00000384893 84 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 MT-TP-201ENST00000387461 68 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 AL359694.1-201ENST00000403247 604 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 AP000357.1-201ENST00000409926 1165 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 RNU6-77P-201ENST00000410554 91 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC009237.2-201ENST00000421358 284 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 AP001324.1-201ENST00000428553 399 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC002069.1-201ENST00000429649 1159 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 GAPDHP34-201ENST00000432112 823 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC069154.1-201ENST00000432914 542 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSU72Q9NP77 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC242426.1-201ENST00000435270 960 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 AL138787.1-202ENST00000437804 898 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 AL022238.1-201ENST00000442557 355 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 OR7E7P-201ENST00000455678 1012 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 RN7SL145P-201ENST00000469955 296 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 MRPL49P1-201ENST00000505951 535 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 SCARNA5-201ENST00000516201 276 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 RNU6-875P-201ENST00000516488 106 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC008802.1-201ENST00000519121 791 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 OR5AK1P-201ENST00000524837 922 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 CCDC58P1-201ENST00000578567 430 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC020914.6-201ENST00000594327 272 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC104117.5-201ENST00000606195 547 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSU72Q9NP77 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SSU72Q9NP77 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSU72Q9NP77 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSU72Q9NP77 AL590763.1-201ENST00000398297 1545 ntBASIC6.45□□□□□ -1.38
SSU72Q9NP77 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSU72Q9NP77 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSU72Q9NP77 AC017104.4-201ENST00000636283 1592 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 LDHAP5-201ENST00000394996 622 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 RNU6-248P-201ENST00000410720 107 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC068533.2-201ENST00000411872 306 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC092745.2-202ENST00000411880 369 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC017035.1-201ENST00000411999 1115 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 AL929472.1-201ENST00000417484 429 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 MRPS21P5-201ENST00000417885 231 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 AL121878.1-201ENST00000418638 859 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 OFD1P12Y-201ENST00000427963 1207 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 RPL31P54-201ENST00000429803 370 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSU72Q9NP77 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC6.44□□□□□ -1.38
SSU72Q9NP77 GAPDHP20-201ENST00000444107 1007 ntBASIC6.44□□□□□ -1.38
SSU72Q9NP77 RPL7P36-201ENST00000444633 681 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms