Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 AL442639.1-201ENST00000625030 1899 ntBASIC4.57□□□□□ -1.68
CHD8Q9HCK8 CASC19-284ENST00000642142 1868 ntBASIC4.57□□□□□ -1.68
CHD8Q9HCK8 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 AL117339.2-201ENST00000430475 180 ntBASIC4.57□□□□□ -1.68
CHD8Q9HCK8 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 GOT2P5-201ENST00000433995 546 ntBASIC4.57□□□□□ -1.68
CHD8Q9HCK8 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 AC090506.2-201ENST00000624521 419 ntBASIC4.57□□□□□ -1.68
CHD8Q9HCK8 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 AC106871.1-201ENST00000568324 3102 ntBASIC4.57□□□□□ -1.68
CHD8Q9HCK8 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 CDY5P-201ENST00000411487 1580 ntBASIC4.57□□□□□ -1.68
CHD8Q9HCK8 CDY9P-201ENST00000451397 1580 ntBASIC4.57□□□□□ -1.68
CHD8Q9HCK8 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 AC097374.1-203ENST00000400783 485 ntBASIC4.57□□□□□ -1.68
CHD8Q9HCK8 MIR1289-1-201ENST00000408836 144 ntBASIC4.57□□□□□ -1.68
CHD8Q9HCK8 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 AC007568.1-201ENST00000422912 471 ntBASIC4.57□□□□□ -1.68
CHD8Q9HCK8 RN7SL98P-201ENST00000462271 300 ntBASIC4.57□□□□□ -1.68
CHD8Q9HCK8 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 FTH1P21-201ENST00000512179 511 ntBASIC4.57□□□□□ -1.68
CHD8Q9HCK8 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHD8Q9HCK8 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 BX322650.1-201ENST00000332359 2143 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 RNU6-301P-201ENST00000384277 107 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 MIR659-201ENST00000384963 97 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 TPT1P2-201ENST00000413105 503 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 AL356095.1-201ENST00000417217 199 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 RPL12P39-201ENST00000455456 496 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 RPS5P7-201ENST00000456664 608 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 AL445687.2-201ENST00000458156 728 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 AL132838.2-201ENST00000492041 314 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 PMS2P3-207ENST00000529061 717 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 HNRNPCP4-201ENST00000571636 900 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 AP001002.2-201ENST00000625137 386 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 ECM1P2-201ENST00000503354 1577 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 STX3-208ENST00000641815 3236 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 MIR640-201ENST00000385086 96 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 AC079922.1-201ENST00000443291 359 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 CT45A11P-201ENST00000448043 1134 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 SNORD125-201ENST00000459538 96 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 AC011497.2-201ENST00000600255 639 ntBASIC4.56□□□□□ -1.68
CHD8Q9HCK8 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHD8Q9HCK8 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CHD8Q9HCK8 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.55□□□□□ -1.68
CHD8Q9HCK8 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms