Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC079148.1-201ENST00000565944 819 ntBASIC5.33□□□□□ -1.56
PCDH9Q9HC56 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDH9Q9HC56 MIR4489-201ENST00000578869 62 ntBASIC5.33□□□□□ -1.56
PCDH9Q9HC56 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH9Q9HC56 AC090330.1-201ENST00000588646 764 ntBASIC5.33□□□□□ -1.56
PCDH9Q9HC56 AL133247.2-201ENST00000603236 482 ntBASIC5.33□□□□□ -1.56
PCDH9Q9HC56 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH9Q9HC56 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.33□□□□□ -1.56
PCDH9Q9HC56 AC079298.2-201ENST00000623885 459 ntBASIC5.33□□□□□ -1.56
PCDH9Q9HC56 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PCDH9Q9HC56 AC026523.2-201ENST00000625039 7739 ntBASIC5.33□□□□□ -1.56
PCDH9Q9HC56 MRRFP1-201ENST00000435941 1675 ntBASIC5.33□□□□□ -1.56
PCDH9Q9HC56 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PCDH9Q9HC56 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PCDH9Q9HC56 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
PCDH9Q9HC56 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PCDH9Q9HC56 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.33□□□□□ -1.56
PCDH9Q9HC56 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 RNA5SP90-201ENST00000364801 99 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 RPL10P10-201ENST00000403509 664 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 MIR1286-201ENST00000408112 78 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 SNORA79B-201ENST00000410557 148 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AL034379.1-201ENST00000423216 253 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 RPL35AP21-201ENST00000437667 333 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 GTF3AP5-201ENST00000442645 697 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 RPS21P4-201ENST00000487122 248 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC011411.1-201ENST00000509592 876 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC108157.1-201ENST00000510511 539 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 RN7SKP157-201ENST00000516174 282 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC106785.3-201ENST00000564064 847 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 RN7SL753P-201ENST00000581238 290 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC242628.1-201ENST00000606810 391 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AL512329.2-201ENST00000607350 548 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC110792.4-201ENST00000609843 298 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC008115.4-201ENST00000619780 775 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC022306.3-201ENST00000619930 550 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC097372.4-201ENST00000625025 466 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AL355480.1-201ENST00000629041 99 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 AC110792.3-201ENST00000595906 1614 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 THAP12P5-201ENST00000405864 2275 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 MUC2-202ENST00000613187 4845 ntBASIC5.32□□□□□ -1.56
PCDH9Q9HC56 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.32□□□□□ -1.56
PCDH9Q9HC56 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 CASC19-221ENST00000641309 1382 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AC007996.1-201ENST00000620414 2821 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 U3.3-201ENST00000362986 216 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AC007068.1-201ENST00000396690 844 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 RN7SKP229-201ENST00000410465 302 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 ELOCP6-201ENST00000429066 328 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 MTND2P21-201ENST00000436242 1042 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 MRPL35P2-201ENST00000448009 511 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 NPM1P19-201ENST00000450070 712 ntBASIC5.31□□□□□ -1.56
PCDH9Q9HC56 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDH9Q9HC56 MTND6P32-201ENST00000457611 483 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms