Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 HIPK2-203ENST00000428878 3969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AP003716.1-202ENST00000511677 3387 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 CPEB1-207ENST00000611031 3074 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AL391666.1-201ENST00000442570 2764 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 EFNB2-201ENST00000245323 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AL031590.1-203ENST00000642075 2747 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 RBM19-202ENST00000392561 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 TSNAX-DISC1-205ENST00000602962 3557 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 ALDH1A2-202ENST00000347587 3297 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 HLA-DQA1-202ENST00000374949 1060 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 DDB2-202ENST00000378600 717 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 NOL6-204ENST00000379471 3843 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 RNU6-1323P-201ENST00000384025 107 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 MIR549A-201ENST00000385268 96 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 FTH1P15-201ENST00000406984 280 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 RNA5SP56-201ENST00000410277 118 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 MIR3681HG-203ENST00000429878 558 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AL954722.1-201ENST00000431238 259 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 VDAC1P3-201ENST00000434069 851 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AC097463.1-201ENST00000447288 481 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 FXYD4-201ENST00000476166 770 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 RN7SL598P-201ENST00000494391 294 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AC233964.1-201ENST00000512165 1089 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 RNU6-126P-201ENST00000516685 103 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AC087360.1-201ENST00000518788 616 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 NDUFC2-KCTD14-201ENST00000528251 566 ntTSL 4 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AC007751.1-201ENST00000529260 376 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 PPP6R3-226ENST00000534534 2968 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AC009248.1-201ENST00000548155 735 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AL391152.1-202ENST00000551408 624 ntTSL 3 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AL162464.2-201ENST00000557761 526 ntTSL 4 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 RN7SL178P-201ENST00000582930 304 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 SNHG15-208ENST00000584327 505 ntTSL 3 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AC091152.3-201ENST00000604227 325 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AL121809.2-201ENST00000613169 341 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AC020765.4-201ENST00000621738 400 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 BCAS3-203ENST00000408905 3514 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 KDM5D-201ENST00000317961 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 SEC23B-203ENST00000377465 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 PIGN-222ENST00000638329 2367 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 MROH7-206ENST00000421030 4329 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 TYW1B-202ENST00000612372 1543 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 DAPK2-201ENST00000261891 2603 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 SLC12A6-207ENST00000558667 3725 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 IPO5P1-201ENST00000593576 2887 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AC009163.7-201ENST00000621929 2557 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 DDX31-205ENST00000438527 2814 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AC090132.1-201ENST00000524071 1480 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 EGFLAM-202ENST00000336740 3071 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AKNAD1-203ENST00000370001 3053 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 SFXN5-201ENST00000272433 4140 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AL589993.1-201ENST00000407450 2524 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 SMLR1-201ENST00000541421 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF417-201ENST00000312026 3597 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 AC007256.1-201ENST00000392253 2765 ntBASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 GALK2-203ENST00000544523 1950 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 ARAP1-205ENST00000426523 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 ASNSD1-201ENST00000260952 2450 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 C5orf56-201ENST00000337752 4767 ntAPPRIS P5 TSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 ANP32E-208ENST00000583931 3451 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 NRXN3-218ENST00000635466 5254 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 THUMPD3-201ENST00000345094 3961 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 CHST4-201ENST00000338482 2412 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
KRTAP3-3Q9BYR6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 AL117258.1-201ENST00000637218 2656 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 LRGUK-201ENST00000285928 3163 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 EPSTI1-201ENST00000313624 3114 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 CATSPER2-203ENST00000396879 3898 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 FAM90A28P-202ENST00000597191 1374 ntBASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 SEMA4G-202ENST00000370250 3596 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 MRVI1-217ENST00000558540 3339 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 PHKA1-203ENST00000373542 6020 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP3-3Q9BYR6 EFHB-201ENST00000295824 2823 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 266.4 ms