Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC002486.2-201ENST00000447806 590 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 YWHAEP1-201ENST00000453697 763 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 UBFD1P1-201ENST00000473259 814 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC107222.1-201ENST00000510899 637 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 SNORA31.13-201ENST00000516624 135 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 RNA5SP278-201ENST00000517055 102 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 IGLVV-66-201ENST00000523818 341 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC068802.1-201ENST00000603420 732 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 DPPA3P3-201ENST00000603842 430 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AC040168.1-201ENST00000623594 991 ntBASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 TRIM49D1-202ENST00000530311 2164 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
COL25A1Q9BXS0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AF131215.2-201ENST00000531549 1710 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 TDGF1P3-202ENST00000602699 2710 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 GUCY2GP-201ENST00000479705 3222 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 PPIAP24-201ENST00000328558 471 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 RNU1-84P-201ENST00000365447 164 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 CISD1P1-201ENST00000393907 327 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AL450338.1-201ENST00000407987 512 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AC109780.2-201ENST00000413467 845 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 MTCO1P54-201ENST00000430139 712 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 RPS10P21-201ENST00000430654 475 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 RPL23AP20-201ENST00000447965 421 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 RPL23AP8-201ENST00000479812 475 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 RNU6-1225P-201ENST00000516336 65 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 OR6M2P-201ENST00000529831 871 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AL161670.1-201ENST00000554348 137 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 MIR5697-201ENST00000578045 78 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AC103710.3-201ENST00000608157 948 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 Mico1.1-201ENST00000611698 204 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AC022106.2-201ENST00000620114 757 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AC015722.2-201ENST00000622210 551 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AC083806.2-201ENST00000617795 2685 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 ZNF583-202ENST00000333201 4916 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 C4BPAP1-201ENST00000415474 1893 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 ELL2P4-201ENST00000446870 1376 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AC011493.1-201ENST00000596753 1632 ntBASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC7.04□□□□□ -1.28
COL25A1Q9BXS0 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms