Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 UBBP2-201ENST00000376781 231 ntBASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 AL021331.1-201ENST00000402817 582 ntBASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 RNU2-50P-201ENST00000410494 143 ntBASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 OR5M12P-201ENST00000423388 929 ntBASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 RPL35AP21-201ENST00000437667 333 ntBASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 RPL36AP15-201ENST00000444514 266 ntBASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 TCEA1P1-201ENST00000449716 880 ntBASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 AL691482.1-201ENST00000453255 87 ntBASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 OR5AN2P-201ENST00000534535 896 ntBASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 MIR4472-2-201ENST00000582069 67 ntBASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.01□□□□□ -1.45
RPAP1Q9BWH6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RPAP1Q9BWH6 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RPAP1Q9BWH6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RPAP1Q9BWH6 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RPAP1Q9BWH6 RNU1-32P-201ENST00000363937 159 ntBASIC6□□□□□ -1.45
RPAP1Q9BWH6 LRRC37BP1-201ENST00000398851 714 ntBASIC6□□□□□ -1.45
RPAP1Q9BWH6 AL136116.2-201ENST00000404020 785 ntBASIC6□□□□□ -1.45
RPAP1Q9BWH6 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 AL450023.3-201ENST00000440592 271 ntBASIC6□□□□□ -1.45
RPAP1Q9BWH6 AC006967.1-201ENST00000467608 589 ntBASIC6□□□□□ -1.45
RPAP1Q9BWH6 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RPAP1Q9BWH6 RN7SL481P-201ENST00000477764 299 ntBASIC6□□□□□ -1.45
RPAP1Q9BWH6 RN7SL459P-201ENST00000481078 302 ntBASIC6□□□□□ -1.45
RPAP1Q9BWH6 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 C1GALT1P3-201ENST00000522049 819 ntBASIC6□□□□□ -1.45
RPAP1Q9BWH6 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 AP006289.1-201ENST00000538089 277 ntBASIC6□□□□□ -1.45
RPAP1Q9BWH6 RN7SL690P-201ENST00000582087 240 ntBASIC6□□□□□ -1.45
RPAP1Q9BWH6 AC209154.1-201ENST00000582156 337 ntBASIC6□□□□□ -1.45
RPAP1Q9BWH6 AC011453.2-201ENST00000603737 729 ntBASIC6□□□□□ -1.45
RPAP1Q9BWH6 Z95327.3-201ENST00000610385 572 ntBASIC6□□□□□ -1.45
RPAP1Q9BWH6 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 AL138820.1-201ENST00000617901 5305 ntBASIC6□□□□□ -1.45
RPAP1Q9BWH6 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RPAP1Q9BWH6 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6□□□□□ -1.45
RPAP1Q9BWH6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RPAP1Q9BWH6 AC093849.1-201ENST00000563631 2209 ntBASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 GTF3AP5-201ENST00000442645 697 ntBASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 AL356981.1-201ENST00000454879 684 ntBASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 HMGB1P4-201ENST00000455362 567 ntBASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 AC023424.1-201ENST00000496058 459 ntBASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 AC105031.1-201ENST00000518550 476 ntBASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 RPL23AP53-201ENST00000521854 457 ntBASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 AC012339.2-201ENST00000523996 453 ntBASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 AC068993.1-201ENST00000546724 589 ntBASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 MIR3936-201ENST00000584304 110 ntBASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 STX3-208ENST00000641815 3236 ntBASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
RPAP1Q9BWH6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.98□□□□□ -1.45
RPAP1Q9BWH6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RPAP1Q9BWH6 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms