Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ABCA3Q99758 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
ABCA3Q99758 MAPK10-349ENST00000641767 3661 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
ABCA3Q99758 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
ABCA3Q99758 SPRR2C-201ENST00000290702 219 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 RNA5SP366-201ENST00000365454 123 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 OR1L6-202ENST00000373684 1044 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 RAB9AP4-201ENST00000415230 609 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 NFYAP1-201ENST00000431953 972 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC6.28□□□□□ -1.4
ABCA3Q99758 SAP18P1-201ENST00000512058 390 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.28□□□□□ -1.4
ABCA3Q99758 AC109635.6-201ENST00000525487 1113 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 HNRNPRP2-201ENST00000528421 743 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ABCA3Q99758 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ABCA3Q99758 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.28□□□□□ -1.4
ABCA3Q99758 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.28□□□□□ -1.4
ABCA3Q99758 AL121932.1-201ENST00000605542 214 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.28□□□□□ -1.4
ABCA3Q99758 AL133243.1-201ENST00000614487 366 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.27□□□□□ -1.4
ABCA3Q99758 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.27□□□□□ -1.41
ABCA3Q99758 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ABCA3Q99758 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ABCA3Q99758 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.27□□□□□ -1.41
ABCA3Q99758 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.27□□□□□ -1.41
ABCA3Q99758 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
ABCA3Q99758 CYP1D1P-201ENST00000416662 1433 ntBASIC6.27□□□□□ -1.41
ABCA3Q99758 ICE2P1-201ENST00000512800 1849 ntBASIC6.27□□□□□ -1.41
ABCA3Q99758 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ABCA3Q99758 AC021146.4-201ENST00000309229 279 ntBASIC6.27□□□□□ -1.41
ABCA3Q99758 RNA5SP241-201ENST00000391326 114 ntBASIC6.27□□□□□ -1.41
ABCA3Q99758 AL583835.1-201ENST00000399570 407 ntBASIC6.27□□□□□ -1.41
ABCA3Q99758 RPL23AP26-201ENST00000412728 464 ntBASIC6.27□□□□□ -1.41
ABCA3Q99758 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ABCA3Q99758 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.27□□□□□ -1.41
ABCA3Q99758 UQCRHP4-201ENST00000471686 272 ntBASIC6.27□□□□□ -1.41
ABCA3Q99758 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.27□□□□□ -1.41
ABCA3Q99758 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.27□□□□□ -1.41
ABCA3Q99758 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.27□□□□□ -1.41
ABCA3Q99758 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
ABCA3Q99758 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
ABCA3Q99758 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.27□□□□□ -1.41
ABCA3Q99758 AP005432.1-201ENST00000580891 3485 ntBASIC6.26□□□□□ -1.41
ABCA3Q99758 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ABCA3Q99758 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC6.26□□□□□ -1.41
ABCA3Q99758 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
ABCA3Q99758 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ABCA3Q99758 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ABCA3Q99758 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
ABCA3Q99758 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ABCA3Q99758 RPL12P9-201ENST00000412942 488 ntBASIC6.26□□□□□ -1.41
ABCA3Q99758 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.26□□□□□ -1.41
ABCA3Q99758 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
ABCA3Q99758 AC010547.7-201ENST00000570323 333 ntBASIC6.26□□□□□ -1.41
ABCA3Q99758 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.26□□□□□ -1.41
ABCA3Q99758 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.26□□□□□ -1.41
ABCA3Q99758 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ABCA3Q99758 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.26□□□□□ -1.41
ABCA3Q99758 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ABCA3Q99758 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
ABCA3Q99758 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
ABCA3Q99758 AC005261.4-201ENST00000600047 1385 ntBASIC6.26□□□□□ -1.41
ABCA3Q99758 AC093829.1-201ENST00000506662 1618 ntBASIC6.26□□□□□ -1.41
ABCA3Q99758 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
ABCA3Q99758 AC005005.4-201ENST00000623789 16698 ntBASIC6.26□□□□□ -1.41
ABCA3Q99758 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ABCA3Q99758 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ABCA3Q99758 AL121950.1-201ENST00000624993 2077 ntBASIC6.25□□□□□ -1.41
ABCA3Q99758 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
ABCA3Q99758 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.25□□□□□ -1.41
ABCA3Q99758 RNU4-64P-201ENST00000410795 131 ntBASIC6.25□□□□□ -1.41
ABCA3Q99758 MTND2P40-201ENST00000436718 841 ntBASIC6.25□□□□□ -1.41
ABCA3Q99758 RN7SL517P-201ENST00000462240 305 ntBASIC6.25□□□□□ -1.41
ABCA3Q99758 RN7SL558P-201ENST00000497468 299 ntBASIC6.25□□□□□ -1.41
ABCA3Q99758 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.25□□□□□ -1.41
ABCA3Q99758 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.25□□□□□ -1.41
ABCA3Q99758 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.25□□□□□ -1.41
ABCA3Q99758 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ABCA3Q99758 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.25□□□□□ -1.41
ABCA3Q99758 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
ABCA3Q99758 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ABCA3Q99758 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ABCA3Q99758 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
ABCA3Q99758 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ABCA3Q99758 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
ABCA3Q99758 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
ABCA3Q99758 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ABCA3Q99758 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.25□□□□□ -1.41
ABCA3Q99758 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
ABCA3Q99758 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
ABCA3Q99758 TRAV35-201ENST00000390462 330 ntBASIC6.25□□□□□ -1.41
ABCA3Q99758 AC138761.5-201ENST00000433967 325 ntBASIC6.25□□□□□ -1.41
ABCA3Q99758 AC004980.3-201ENST00000447046 365 ntBASIC6.25□□□□□ -1.41
ABCA3Q99758 NUTF2P3-201ENST00000448540 384 ntBASIC6.25□□□□□ -1.41
ABCA3Q99758 SCARNA10-201ENST00000459255 330 ntBASIC6.25□□□□□ -1.41
ABCA3Q99758 RN7SL810P-201ENST00000493031 276 ntBASIC6.25□□□□□ -1.41
ABCA3Q99758 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms