Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC7.88□□□□□ -1.15
IFT140Q96RY7 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.88□□□□□ -1.15
IFT140Q96RY7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.88□□□□□ -1.15
IFT140Q96RY7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
IFT140Q96RY7 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
IFT140Q96RY7 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
IFT140Q96RY7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.88□□□□□ -1.15
IFT140Q96RY7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
IFT140Q96RY7 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
IFT140Q96RY7 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
IFT140Q96RY7 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 RNA5SP387-201ENST00000364226 106 ntBASIC7.87□□□□□ -1.15
IFT140Q96RY7 MIR554-201ENST00000384874 96 ntBASIC7.87□□□□□ -1.15
IFT140Q96RY7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 AP000827.1-201ENST00000527814 258 ntBASIC7.87□□□□□ -1.15
IFT140Q96RY7 IPO5P1-202ENST00000600039 287 ntBASIC7.87□□□□□ -1.15
IFT140Q96RY7 AP001267.4-201ENST00000602598 545 ntBASIC7.87□□□□□ -1.15
IFT140Q96RY7 MIR6133-201ENST00000617057 108 ntBASIC7.87□□□□□ -1.15
IFT140Q96RY7 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
IFT140Q96RY7 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
IFT140Q96RY7 AL355488.2-201ENST00000609909 2850 ntBASIC7.87□□□□□ -1.15
IFT140Q96RY7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
IFT140Q96RY7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
IFT140Q96RY7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
IFT140Q96RY7 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
IFT140Q96RY7 SNORA71.3-201ENST00000362582 128 ntBASIC7.87□□□□□ -1.15
IFT140Q96RY7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 CYCSP19-201ENST00000411715 316 ntBASIC7.87□□□□□ -1.15
IFT140Q96RY7 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 GAPDHP14-201ENST00000450472 937 ntBASIC7.87□□□□□ -1.15
IFT140Q96RY7 RPL7L1P8-201ENST00000469911 741 ntBASIC7.87□□□□□ -1.15
IFT140Q96RY7 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 AL133372.1-201ENST00000493565 745 ntBASIC7.87□□□□□ -1.15
IFT140Q96RY7 RNU1-45P-201ENST00000517191 141 ntBASIC7.87□□□□□ -1.15
IFT140Q96RY7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 RPL7P50-201ENST00000600588 727 ntBASIC7.87□□□□□ -1.15
IFT140Q96RY7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
IFT140Q96RY7 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
IFT140Q96RY7 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
IFT140Q96RY7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC7.86□□□□□ -1.15
IFT140Q96RY7 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
IFT140Q96RY7 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
IFT140Q96RY7 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
IFT140Q96RY7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
IFT140Q96RY7 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
IFT140Q96RY7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.86□□□□□ -1.15
IFT140Q96RY7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC7.86□□□□□ -1.15
IFT140Q96RY7 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
IFT140Q96RY7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
IFT140Q96RY7 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
IFT140Q96RY7 AC020656.2-201ENST00000613291 5309 ntBASIC7.86□□□□□ -1.15
IFT140Q96RY7 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
IFT140Q96RY7 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC7.86□□□□□ -1.15
IFT140Q96RY7 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC7.86□□□□□ -1.15
IFT140Q96RY7 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC7.86□□□□□ -1.15
IFT140Q96RY7 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
IFT140Q96RY7 RN7SKP248-201ENST00000516278 305 ntBASIC7.86□□□□□ -1.15
IFT140Q96RY7 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.86□□□□□ -1.15
IFT140Q96RY7 AP005901.4-201ENST00000577336 569 ntBASIC7.86□□□□□ -1.15
IFT140Q96RY7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC7.86□□□□□ -1.15
IFT140Q96RY7 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.86□□□□□ -1.15
IFT140Q96RY7 AC004777.1-201ENST00000624317 287 ntBASIC7.86□□□□□ -1.15
IFT140Q96RY7 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
IFT140Q96RY7 MFSD8-242ENST00000641690 4199 ntBASIC7.86□□□□□ -1.15
IFT140Q96RY7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC7.86□□□□□ -1.15
IFT140Q96RY7 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC7.86□□□□□ -1.15
IFT140Q96RY7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC7.86□□□□□ -1.15
IFT140Q96RY7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
IFT140Q96RY7 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
IFT140Q96RY7 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
IFT140Q96RY7 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
IFT140Q96RY7 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
IFT140Q96RY7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC7.85□□□□□ -1.15
IFT140Q96RY7 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
IFT140Q96RY7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
IFT140Q96RY7 SNORD46.1-201ENST00000364139 104 ntBASIC7.85□□□□□ -1.15
IFT140Q96RY7 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC7.85□□□□□ -1.15
IFT140Q96RY7 TMBIM7P-201ENST00000418074 855 ntBASIC7.85□□□□□ -1.15
IFT140Q96RY7 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC7.85□□□□□ -1.15
IFT140Q96RY7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.85□□□□□ -1.15
IFT140Q96RY7 AL359265.1-201ENST00000440296 795 ntBASIC7.85□□□□□ -1.15
IFT140Q96RY7 H2AFZP5-201ENST00000446960 382 ntBASIC7.85□□□□□ -1.15
IFT140Q96RY7 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC7.85□□□□□ -1.15
IFT140Q96RY7 AC023632.4-201ENST00000517783 191 ntBASIC7.85□□□□□ -1.15
IFT140Q96RY7 TRAV8-5-201ENST00000537369 341 ntBASIC7.85□□□□□ -1.15
IFT140Q96RY7 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.85□□□□□ -1.15
IFT140Q96RY7 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.85□□□□□ -1.15
IFT140Q96RY7 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.85□□□□□ -1.15
IFT140Q96RY7 AL356863.1-201ENST00000623378 1080 ntBASIC7.85□□□□□ -1.15
IFT140Q96RY7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
IFT140Q96RY7 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
IFT140Q96RY7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms