Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SYNGAP1Q96PV0 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.28
SYNGAP1Q96PV0 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.09□□□□□ -1.28
SYNGAP1Q96PV0 DOCK11P1-201ENST00000553480 5932 ntBASIC7.09□□□□□ -1.28
SYNGAP1Q96PV0 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.09□□□□□ -1.28
SYNGAP1Q96PV0 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC009779.8-201ENST00000641684 4384 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 OR52B5P-204ENST00000641744 3467 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 RN7SKP115-201ENST00000363177 317 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 RNU1-49P-201ENST00000363468 159 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 RNU6-1119P-201ENST00000384349 108 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 SNORD65C-201ENST00000390962 71 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 CHMP1B2P-201ENST00000399581 597 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 OR2AT2P-201ENST00000413438 905 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 TAF13P2-201ENST00000416876 286 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 ZNF863P-201ENST00000426746 417 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC097721.1-201ENST00000427150 1253 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 MGAT2P2-201ENST00000427194 797 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 RBMX2P4-201ENST00000441256 376 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC010285.3-201ENST00000511668 676 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 RNA5SP434-201ENST00000516647 121 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AP003392.2-201ENST00000527269 208 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AP002963.1-201ENST00000530590 184 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AP005205.1-201ENST00000563503 508 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC079171.1-201ENST00000568788 914 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 WISP1-OT1-201ENST00000602893 642 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AC018445.2-201ENST00000622987 260 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AL132640.3-201ENST00000630473 177 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AL049767.1-202ENST00000637826 242 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 OR11H2-202ENST00000641517 1085 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 AL137100.1-201ENST00000556703 1620 ntBASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SYNGAP1Q96PV0 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 AC026951.1-201ENST00000559530 2459 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 RNU1-87P-201ENST00000363727 170 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 RNA5SP242-201ENST00000364171 118 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 MIR585-201ENST00000384887 94 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 NDUFS5P5-201ENST00000437256 321 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 GAPDHP58-201ENST00000438477 1006 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 AL161636.2-201ENST00000445179 927 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 UBE2V1P7-201ENST00000446395 340 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 ZNF114P1-201ENST00000453500 292 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 ACA64.1-201ENST00000459171 127 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 AC107015.1-201ENST00000466902 747 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 GTF2F2P1-201ENST00000511083 675 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 ATP5LP3-201ENST00000514223 304 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 SCARNA18.1-201ENST00000516330 83 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 MTCYBP19-201ENST00000517463 1124 ntBASIC7.07□□□□□ -1.28
SYNGAP1Q96PV0 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms