Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 AC099494.2-201ENST00000623371 978 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.09□□□□□ -1.59
C9orf72Q96LT7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.09□□□□□ -1.59
C9orf72Q96LT7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.09□□□□□ -1.6
C9orf72Q96LT7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
C9orf72Q96LT7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
C9orf72Q96LT7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
C9orf72Q96LT7 TTC39DP-201ENST00000416781 1688 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AC009643.2-201ENST00000603543 1448 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 SNORA70.10-201ENST00000384515 134 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AL589647.1-201ENST00000402485 466 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AC093162.1-201ENST00000419682 124 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 CKS1BP6-201ENST00000424932 240 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AL645937.3-201ENST00000453647 936 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AC092490.3-201ENST00000545370 572 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AC010547.7-201ENST00000570323 333 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 MIR4646-201ENST00000580775 63 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AC011447.4-201ENST00000587562 111 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AC015849.6-201ENST00000605454 474 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AL672167.1-203ENST00000641299 2975 ntBASIC5.08□□□□□ -1.6
C9orf72Q96LT7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
C9orf72Q96LT7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 MTCO1P15-201ENST00000529569 1526 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AC131971.1-201ENST00000332881 1482 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AC073429.2-201ENST00000569694 1444 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 SNORA73.1-201ENST00000363107 205 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 VN1R54P-201ENST00000435210 1049 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 PSMD10P3-201ENST00000437000 448 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AC112206.1-201ENST00000468416 477 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AC090114.3-201ENST00000479267 829 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AC013701.1-201ENST00000522657 465 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AP000676.2-201ENST00000529711 301 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 EIF4A2P5-201ENST00000529914 499 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 SETP1-201ENST00000556014 845 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AC024940.4-201ENST00000605507 246 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AC133644.2-201ENST00000608142 540 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AC016252.1-201ENST00000609721 474 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 AC107068.1-201ENST00000563286 4218 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 NAMPTP1-201ENST00000440465 2514 ntBASIC5.07□□□□□ -1.6
C9orf72Q96LT7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.07□□□□□ -1.6
C9orf72Q96LT7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
C9orf72Q96LT7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms