Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 OR51A6P-201ENST00000418680 1004 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 PNRC2P1-201ENST00000423940 420 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 DEFB130D-201ENST00000426866 237 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 BX276092.6-201ENST00000430476 250 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC023512.1-201ENST00000444513 499 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 HMGB1P5-202ENST00000451497 985 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 BX276092.8-201ENST00000455722 250 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AP005403.1-201ENST00000579720 229 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC099785.1-201ENST00000605697 437 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC006946.3-201ENST00000609791 756 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 RN7SL787P-201ENST00000613000 284 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 MIR6133-201ENST00000617057 108 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC006840.1-201ENST00000623069 542 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AL078595.3-201ENST00000623815 1166 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 CU639417.4-201ENST00000623928 207 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 VPS35P1-201ENST00000563400 1518 ntBASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CDK5RAP3Q96JB5 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 TTC39DP-201ENST00000416781 1688 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 RNA5SP178-201ENST00000410380 128 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AL596448.1-201ENST00000415024 392 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AC115285.1-201ENST00000424879 736 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AC022022.1-201ENST00000430304 178 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 MTND2P2-201ENST00000434633 945 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 RPS7P2-201ENST00000435134 607 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 CYCSP42-201ENST00000450823 238 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AL133244.1-201ENST00000456007 258 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 RN7SKP141-201ENST00000516167 338 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AC027544.3-201ENST00000535082 757 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 FO393422.1-201ENST00000603908 708 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AL445435.1-201ENST00000604232 665 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AP002802.2-201ENST00000605877 235 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AC007786.3-201ENST00000615154 596 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 AL109659.3-201ENST00000624985 950 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 SAMMSON-213ENST00000641336 1521 ntBASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP3Q96JB5 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP3Q96JB5 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms