Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 RNU6-31P-201ENST00000384388 108 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 MIR320B1-201ENST00000390209 79 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 SNORA68.2-201ENST00000391263 128 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 NPM1P10-201ENST00000398310 865 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 MARK2P12-201ENST00000420129 585 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AL590609.2-201ENST00000421430 368 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 GAPDHP34-201ENST00000432112 823 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 PCNPP2-201ENST00000441651 455 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AC011225.1-201ENST00000457751 369 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 RNU7-27P-201ENST00000459281 62 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 RPL21P6-201ENST00000479171 504 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AC005412.2-201ENST00000492004 341 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 NIFKP7-201ENST00000503365 834 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 CDH12P2-201ENST00000504393 298 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AC093770.1-201ENST00000511559 571 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AC108471.1-201ENST00000513977 287 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AL049779.2-201ENST00000553847 315 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AC012414.2-201ENST00000559474 187 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 SS18L2P2-201ENST00000583960 235 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AC095055.1-201ENST00000603472 1113 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AP005432.2-201ENST00000608162 586 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AP000648.2-201ENST00000624182 404 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AC005332.5-201ENST00000591222 2919 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 SMG1P6-201ENST00000532337 2930 ntBASIC5.07□□□□□ -1.6
PDLIM5Q96HC4 AL359715.4-201ENST00000606629 1436 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AL450326.2-201ENST00000421913 1962 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AC093719.1-202ENST00000392735 373 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AL136116.2-201ENST00000404020 785 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 RN7SKP16-201ENST00000410180 299 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AL139148.1-201ENST00000427122 680 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 RPL12P11-201ENST00000439970 501 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 RPL7AP61-201ENST00000443410 636 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AC245028.2-201ENST00000458673 253 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 RPS21P4-201ENST00000487122 248 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 MTND2P31-201ENST00000512602 616 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 RNA5SP362-201ENST00000516048 118 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 FTH1P11-201ENST00000517577 551 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 IGKV3D-34-201ENST00000522638 302 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 OR4A46P-201ENST00000527255 933 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AL390334.1-201ENST00000556395 450 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 FKBP1AP1-201ENST00000594588 318 ntBASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM5Q96HC4 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms