Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AL355488.2-201ENST00000609909 2850 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 SCARNA15-201ENST00000607520 4325 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AC092681.1-201ENST00000297369 291 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 OR1F12-201ENST00000402365 945 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 RANP4-201ENST00000413361 655 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 NDUFA5P10-201ENST00000432147 357 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 SUMO2P1-206ENST00000445436 284 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AC092647.2-201ENST00000452998 253 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 HIGD1AP8-201ENST00000453927 274 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 snoU109.6-201ENST00000516831 118 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AC012400.1-201ENST00000518452 381 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 OR8G3P-201ENST00000533406 921 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 SULT1C2P2-201ENST00000562517 294 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AC009027.1-201ENST00000604510 479 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 EIF3FP1-201ENST00000613970 806 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AL354696.1-201ENST00000614652 497 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 uc_338.7-201ENST00000621834 124 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AC145207.9-201ENST00000623802 325 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 AC138965.3-201ENST00000623875 498 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 PANDAR-201ENST00000629595 1506 ntBASIC5.32□□□□□ -1.56
SIPA1Q96FS4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIPA1Q96FS4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 RNU6-40P-201ENST00000384254 107 ntBASIC5.31□□□□□ -1.56
SIPA1Q96FS4 RNA5SP187-201ENST00000384400 119 ntBASIC5.31□□□□□ -1.56
SIPA1Q96FS4 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 MTCYBP12-201ENST00000440559 1134 ntBASIC5.31□□□□□ -1.56
SIPA1Q96FS4 AC073465.2-201ENST00000440938 498 ntBASIC5.31□□□□□ -1.56
SIPA1Q96FS4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 RPS15AP29-201ENST00000445539 400 ntBASIC5.31□□□□□ -1.56
SIPA1Q96FS4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 AC002553.2-201ENST00000453217 340 ntBASIC5.31□□□□□ -1.56
SIPA1Q96FS4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 AC021106.1-201ENST00000509020 1058 ntBASIC5.31□□□□□ -1.56
SIPA1Q96FS4 AC108120.2-201ENST00000512973 294 ntBASIC5.31□□□□□ -1.56
SIPA1Q96FS4 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 OR11H3P-201ENST00000554547 982 ntBASIC5.31□□□□□ -1.56
SIPA1Q96FS4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 AC242628.1-201ENST00000606810 391 ntBASIC5.31□□□□□ -1.56
SIPA1Q96FS4 AC135068.5-201ENST00000624197 983 ntBASIC5.31□□□□□ -1.56
SIPA1Q96FS4 AC083843.2-201ENST00000568248 6253 ntBASIC5.31□□□□□ -1.56
SIPA1Q96FS4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SIPA1Q96FS4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIPA1Q96FS4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SIPA1Q96FS4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.3□□□□□ -1.56
SIPA1Q96FS4 HSPA8P14-201ENST00000552265 1805 ntBASIC5.3□□□□□ -1.56
SIPA1Q96FS4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIPA1Q96FS4 THAP12P4-201ENST00000528321 2266 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms