Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 OR1F12-201ENST00000402365 945 ntBASIC7.9□□□□□ -1.14
TOPBP1Q92547 QRSL1P2-201ENST00000418582 964 ntBASIC7.9□□□□□ -1.14
TOPBP1Q92547 AC104763.1-201ENST00000475274 360 ntBASIC7.9□□□□□ -1.14
TOPBP1Q92547 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC7.9□□□□□ -1.14
TOPBP1Q92547 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.9□□□□□ -1.14
TOPBP1Q92547 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TOPBP1Q92547 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC7.9□□□□□ -1.14
TOPBP1Q92547 RN7SL176P-201ENST00000580352 264 ntBASIC7.9□□□□□ -1.14
TOPBP1Q92547 SNORA74C-1-201ENST00000580726 201 ntBASIC7.9□□□□□ -1.14
TOPBP1Q92547 AC099676.1-201ENST00000608886 657 ntBASIC7.9□□□□□ -1.14
TOPBP1Q92547 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
TOPBP1Q92547 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC7.9□□□□□ -1.14
TOPBP1Q92547 AP005019.3-201ENST00000620418 560 ntBASIC7.9□□□□□ -1.14
TOPBP1Q92547 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.9□□□□□ -1.14
TOPBP1Q92547 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TOPBP1Q92547 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
TOPBP1Q92547 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.14
TOPBP1Q92547 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
TOPBP1Q92547 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TOPBP1Q92547 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
TOPBP1Q92547 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
TOPBP1Q92547 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
TOPBP1Q92547 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
TOPBP1Q92547 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
TOPBP1Q92547 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
TOPBP1Q92547 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.9□□□□□ -1.15
TOPBP1Q92547 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
TOPBP1Q92547 AMZ2P2-201ENST00000406819 1057 ntBASIC7.89□□□□□ -1.15
TOPBP1Q92547 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC7.89□□□□□ -1.15
TOPBP1Q92547 VN1R37P-201ENST00000419096 748 ntBASIC7.89□□□□□ -1.15
TOPBP1Q92547 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TOPBP1Q92547 SCARNA10-201ENST00000459255 330 ntBASIC7.89□□□□□ -1.15
TOPBP1Q92547 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC7.89□□□□□ -1.15
TOPBP1Q92547 RPS27AP16-201ENST00000492222 470 ntBASIC7.89□□□□□ -1.15
TOPBP1Q92547 RN7SKP67-201ENST00000515905 235 ntBASIC7.89□□□□□ -1.15
TOPBP1Q92547 SNORA31.9-201ENST00000516429 84 ntBASIC7.89□□□□□ -1.15
TOPBP1Q92547 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.89□□□□□ -1.15
TOPBP1Q92547 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC7.89□□□□□ -1.15
TOPBP1Q92547 AP001160.4-201ENST00000596971 382 ntBASIC7.89□□□□□ -1.15
TOPBP1Q92547 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.89□□□□□ -1.15
TOPBP1Q92547 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TOPBP1Q92547 AC090017.1-201ENST00000548612 1779 ntBASIC7.89□□□□□ -1.15
TOPBP1Q92547 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
TOPBP1Q92547 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TOPBP1Q92547 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TOPBP1Q92547 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TOPBP1Q92547 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC7.89□□□□□ -1.15
TOPBP1Q92547 ST7-212ENST00000422922 1887 ntTSL 5 BASIC7.89□□□□□ -1.15
TOPBP1Q92547 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
TOPBP1Q92547 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
TOPBP1Q92547 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 ARL4AP5-201ENST00000404372 599 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 RPL12P9-201ENST00000412942 488 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 RCC2P2-201ENST00000422174 918 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 AC138761.5-201ENST00000433967 325 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 H2AFZP5-201ENST00000446960 382 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 NIFKP7-201ENST00000503365 834 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 RPL7P50-201ENST00000600588 727 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TOPBP1Q92547 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TOPBP1Q92547 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TOPBP1Q92547 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TOPBP1Q92547 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TOPBP1Q92547 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
TOPBP1Q92547 VN2R3P-201ENST00000422626 1412 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TOPBP1Q92547 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 RNU1-130P-201ENST00000363930 160 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 AC105137.1-201ENST00000484355 562 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 AC108475.1-201ENST00000507880 950 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 Y_RNA.719-201ENST00000517156 106 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 MTCO1P49-201ENST00000523429 802 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 AP000827.1-201ENST00000527814 258 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 PSMB7P1-201ENST00000556349 514 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.88□□□□□ -1.15
TOPBP1Q92547 OR7A19P-201ENST00000608051 733 ntBASIC7.88□□□□□ -1.15
TOPBP1Q92547 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
TOPBP1Q92547 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.87□□□□□ -1.15
TOPBP1Q92547 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TOPBP1Q92547 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.87□□□□□ -1.15
TOPBP1Q92547 AC107068.1-201ENST00000563286 4218 ntBASIC7.87□□□□□ -1.15
TOPBP1Q92547 AC073365.1-203ENST00000641055 1992 ntBASIC7.87□□□□□ -1.15
TOPBP1Q92547 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TOPBP1Q92547 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TOPBP1Q92547 SPRR2C-201ENST00000290702 219 ntBASIC7.87□□□□□ -1.15
TOPBP1Q92547 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms