Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC44A1Q8WWI5 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A1Q8WWI5 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
SLC44A1Q8WWI5 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A1Q8WWI5 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A1Q8WWI5 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A1Q8WWI5 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A1Q8WWI5 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A1Q8WWI5 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A1Q8WWI5 AL356317.1-201ENST00000396110 1436 ntBASIC5.21□□□□□ -1.58
SLC44A1Q8WWI5 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A1Q8WWI5 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A1Q8WWI5 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A1Q8WWI5 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SLC44A1Q8WWI5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 RNA5SP234-201ENST00000363916 119 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AL672167.2-201ENST00000377164 879 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 OR8V1P-201ENST00000395193 873 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 PTGES3P2-201ENST00000407942 482 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 SDHDP6-201ENST00000414693 480 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AL139148.1-201ENST00000427122 680 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 DSTNP5-201ENST00000427921 523 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AL157884.3-201ENST00000448273 1184 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AC239798.3-201ENST00000454459 408 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 RPS27AP2-201ENST00000457576 465 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 RPSAP39-201ENST00000467439 883 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AC078857.1-201ENST00000469870 667 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 RPL23AP73-201ENST00000492507 471 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AC073073.1-201ENST00000493920 463 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AC010468.3-201ENST00000508225 458 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AP001804.2-201ENST00000533932 910 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 SETP1-201ENST00000556014 845 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AC079148.1-201ENST00000565944 819 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 MIR1273E-201ENST00000581165 102 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 BNIP3P35-201ENST00000604530 490 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AC242628.1-201ENST00000606810 391 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AC120053.1-201ENST00000607706 736 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AL159169.2-201ENST00000610061 1269 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 RMST_5.1-201ENST00000618704 126 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AL590396.2-201ENST00000636511 1041 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 CDC27P2-201ENST00000425026 1922 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AL136520.1-201ENST00000600311 1322 ntBASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC44A1Q8WWI5 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 STX3-208ENST00000641815 3236 ntBASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 RNA5SP335-201ENST00000363817 110 ntBASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 RNA5SP90-201ENST00000364801 99 ntBASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 MIR105-1-201ENST00000385222 81 ntBASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 SNORD65-201ENST00000391079 73 ntBASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 MTND2P9-201ENST00000422293 931 ntBASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A1Q8WWI5 AL513321.1-201ENST00000441175 761 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms